Cluster: Rep_534_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_534
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_534_c_5 | Rep_534_c_5_67 | 83670 | 86081 | + | 3.A.10.1.10 |
| CAZyme | Rep_534_c_5 | Rep_534_c_5_68 | 86197 | 87156 | + | GH43_18 |
| pfam | Rep_534_c_5 | Rep_534_c_5_69 | 87299 | 87913 | - | DUF4923 |
| CAZyme | Rep_534_c_5 | Rep_534_c_5_70 | 88060 | 89748 | + | PL1_2 |
| pfam | Rep_534_c_5 | Rep_534_c_5_71 | 89764 | 92850 | + | DUF6298 |
| TC | Rep_534_c_5 | Rep_534_c_5_72 | 93517 | 94113 | - | 2.A.95.1.4 |
Gene ID: Rep_534_c_5_67
Type: TC
Location: 83670 - 86081 (+)
Type: TC
Location: 83670 - 86081 (+)
Gene ID: Rep_534_c_5_68
Type: CAZyme
Location: 86197 - 87156 (+)
Type: CAZyme
Location: 86197 - 87156 (+)
Gene ID: Rep_534_c_5_69
Type: pfam
Location: 87299 - 87913 (-)
Type: pfam
Location: 87299 - 87913 (-)
Gene ID: Rep_534_c_5_70
Type: CAZyme
Location: 88060 - 89748 (+)
Type: CAZyme
Location: 88060 - 89748 (+)
Gene ID: Rep_534_c_5_71
Type: pfam
Location: 89764 - 92850 (+)
Type: pfam
Location: 89764 - 92850 (+)
Gene ID: Rep_534_c_5_72
Type: TC
Location: 93517 - 94113 (-)
Type: TC
Location: 93517 - 94113 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp003489705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.