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Cluster: Rep_534_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_534_c_11 Rep_534_c_11_59 61186 62418 - 9.B.156.3.1
pfam Rep_534_c_11 Rep_534_c_11_60 62871 63785 + AP_endonuc_2
TC Rep_534_c_11 Rep_534_c_11_61 63974 67438 + 1.B.14.6.1
pfam Rep_534_c_11 Rep_534_c_11_62 67485 69752 + SusD_RagB | SusD-like_3
TC Rep_534_c_11 Rep_534_c_11_63 69862 71079 - 1.A.23.4.5
NULL(UNKNOWN) Rep_534_c_11 Rep_534_c_11_64 71220 71477 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_534_c_11 Rep_534_c_11_65 71490 71657 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_534_c_11 Rep_534_c_11_66 71626 72585 + 2.A.4.7.9
pfam Rep_534_c_11 Rep_534_c_11_67 72668 73075 + 4HBT | 4HBT_2
TC Rep_534_c_11 Rep_534_c_11_68 73068 74183 + 3.A.11.1.3
peptidase Rep_534_c_11 Rep_534_c_11_69 74229 75608 + S33.UPW
pfam Rep_534_c_11 Rep_534_c_11_70 75693 76577 + ZnuA
TC Rep_534_c_11 Rep_534_c_11_71 76630 77397 + 3.A.1.15.11
CAZyme Rep_534_c_11 Rep_534_c_11_72 77554 79050 + GH109
pfam Rep_534_c_11 Rep_534_c_11_73 79216 82590 + TMEM260-like
CAZyme Rep_534_c_11 Rep_534_c_11_74 82597 83208 + CE4
Gene ID: Rep_534_c_11_59
Type: TC
Location: 61186 - 62418 (-)
Gene ID: Rep_534_c_11_60
Type: pfam
Location: 62871 - 63785 (+)
Gene ID: Rep_534_c_11_61
Type: TC
Location: 63974 - 67438 (+)
Gene ID: Rep_534_c_11_62
Type: pfam
Location: 67485 - 69752 (+)
Gene ID: Rep_534_c_11_63
Type: TC
Location: 69862 - 71079 (-)
Gene ID: Rep_534_c_11_64
Type:
Location: 71220 - 71477 (+)
Gene ID: Rep_534_c_11_65
Type:
Location: 71490 - 71657 (+)
Gene ID: Rep_534_c_11_66
Type: TC
Location: 71626 - 72585 (+)
Gene ID: Rep_534_c_11_67
Type: pfam
Location: 72668 - 73075 (+)
Gene ID: Rep_534_c_11_68
Type: TC
Location: 73068 - 74183 (+)
Gene ID: Rep_534_c_11_69
Type: peptidase
Location: 74229 - 75608 (+)
Gene ID: Rep_534_c_11_70
Type: pfam
Location: 75693 - 76577 (+)
Gene ID: Rep_534_c_11_71
Type: TC
Location: 76630 - 77397 (+)
Gene ID: Rep_534_c_11_72
Type: CAZyme
Location: 77554 - 79050 (+)
Gene ID: Rep_534_c_11_73
Type: pfam
Location: 79216 - 82590 (+)
Gene ID: Rep_534_c_11_74
Type: CAZyme
Location: 82597 - 83208 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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