Cluster: Rep_534_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_534
- CGC Family ID: CGCFAM_00640
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_534_c_14 | Rep_534_c_14_21 | 26310 | 27170 | - | CBM50 |
| pfam | Rep_534_c_14 | Rep_534_c_14_22 | 27185 | 27655 | - | NDK |
| TC | Rep_534_c_14 | Rep_534_c_14_23 | 28626 | 30035 | - | 9.B.18.1.1 |
Gene ID: Rep_534_c_14_21
Type: CAZyme
Location: 26310 - 27170 (-)
Type: CAZyme
Location: 26310 - 27170 (-)
Gene ID: Rep_534_c_14_22
Type: pfam
Location: 27185 - 27655 (-)
Type: pfam
Location: 27185 - 27655 (-)
Gene ID: Rep_534_c_14_23
Type: TC
Location: 28626 - 30035 (-)
Type: TC
Location: 28626 - 30035 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp003489705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.