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Cluster: Rep_534_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_534_c_7 Rep_534_c_7_59 63268 64476 + 2.A.1.2.97
NULL(UNKNOWN) Rep_534_c_7 Rep_534_c_7_60 64515 65162 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_534_c_7 Rep_534_c_7_61 65427 66743 - OEP | OEP
TC Rep_534_c_7 Rep_534_c_7_62 66740 69775 - 2.A.6.2.33
TC Rep_534_c_7 Rep_534_c_7_63 69788 70870 - 2.A.6.2.28
pfam Rep_534_c_7 Rep_534_c_7_64 71052 71984 - MMR_HSR1 | RsgA_GTPase | RsgA_N
pfam Rep_534_c_7 Rep_534_c_7_65 72139 72699 - RRF
CAZyme Rep_534_c_7 Rep_534_c_7_66 72797 73564 - GT2
CAZyme Rep_534_c_7 Rep_534_c_7_67 73573 74829 - GT4
Gene ID: Rep_534_c_7_59
Type: TC
Location: 63268 - 64476 (+)
Gene ID: Rep_534_c_7_60
Type:
Location: 64515 - 65162 (-)
Gene ID: Rep_534_c_7_61
Type: pfam
Location: 65427 - 66743 (-)
Gene ID: Rep_534_c_7_62
Type: TC
Location: 66740 - 69775 (-)
Gene ID: Rep_534_c_7_63
Type: TC
Location: 69788 - 70870 (-)
Gene ID: Rep_534_c_7_64
Type: pfam
Location: 71052 - 71984 (-)
Gene ID: Rep_534_c_7_65
Type: pfam
Location: 72139 - 72699 (-)
Gene ID: Rep_534_c_7_66
Type: CAZyme
Location: 72797 - 73564 (-)
Gene ID: Rep_534_c_7_67
Type: CAZyme
Location: 73573 - 74829 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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