Cluster: Rep_534_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_534
- CGC Family ID: CGCFAM_04939
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_534_c_15 | Rep_534_c_15_12 | 15836 | 16756 | + | GH25 |
| pfam | Rep_534_c_15 | Rep_534_c_15_13 | 16838 | 17920 | + | Lactamase_B | Lactamase_B_2 | Lactamase_B_3 |
| STP | Rep_534_c_15 | Rep_534_c_15_14 | 18206 | 19405 | + | Aminotran_1_2 |
| TC | Rep_534_c_15 | Rep_534_c_15_15 | 19437 | 20684 | + | 3.A.1.125.5 |
Gene ID: Rep_534_c_15_12
Type: CAZyme
Location: 15836 - 16756 (+)
Type: CAZyme
Location: 15836 - 16756 (+)
Gene ID: Rep_534_c_15_13
Type: pfam
Location: 16838 - 17920 (+)
Type: pfam
Location: 16838 - 17920 (+)
Gene ID: Rep_534_c_15_14
Type: STP
Location: 18206 - 19405 (+)
Type: STP
Location: 18206 - 19405 (+)
Gene ID: Rep_534_c_15_15
Type: TC
Location: 19437 - 20684 (+)
Type: TC
Location: 19437 - 20684 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp003489705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.