dbCAN Logo

Genome Details

Selected Rep_genome_ID: HRGMv2_3185
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Gemmiger
→
Species
Gemmiger sp905214345
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_3185 2,825,363 96.59% 0% South Korea Asia HRGM
MGYG000004732 2,775,580 96.78% 0.34% China Asia UHGG
Rep_3061 2,592,508 93.2437% 0.680272% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_3185_CGC15 CGCFAM_00038 Yes 3 2
HRGMv2_3185_CGC19 CGCFAM_00070 Yes 3 1
HRGMv2_3185_CGC50 CGCFAM_00100 Yes 7 2
HRGMv2_3185_CGC31 CGCFAM_00102 Yes 8 2
HRGMv2_3185_CGC48 CGCFAM_00122 Yes 12 5
HRGMv2_3185_CGC10 CGCFAM_00185 Yes 5 3
HRGMv2_3185_CGC3 CGCFAM_00226 Yes 18 8 beta-mannan
HRGMv2_3185_CGC18 CGCFAM_00233 Yes 6 1
HRGMv2_3185_CGC16 CGCFAM_00302 Yes 11 1
HRGMv2_3185_CGC37 CGCFAM_00342 Yes 8 3
HRGMv2_3185_CGC26 CGCFAM_00389 Yes 5 2
HRGMv2_3185_CGC49 CGCFAM_00662 Yes 4 2
HRGMv2_3185_CGC22 CGCFAM_01314 Yes 5 1
HRGMv2_3185_CGC33 CGCFAM_01318 Yes 7 1
HRGMv2_3185_CGC28 CGCFAM_01507 Yes 3 1
HRGMv2_3185_CGC42 CGCFAM_01647 Yes 4 2
HRGMv2_3185_CGC35 CGCFAM_01883 Yes 7 1
HRGMv2_3185_CGC9 CGCFAM_02189 Yes 6 1
HRGMv2_3185_CGC32 CGCFAM_02254 Yes 7 1
HRGMv2_3185_CGC6 CGCFAM_02572 Yes 3 1
HRGMv2_3185_CGC29 CGCFAM_02902 Yes 9 1
HRGMv2_3185_CGC11 CGCFAM_03285 Yes 6 3
HRGMv2_3185_CGC41 CGCFAM_04013 Yes 12 8
HRGMv2_3185_CGC51 CGCFAM_04433 Yes 3 1
HRGMv2_3185_CGC52 CGCFAM_06206 Yes 7 1
Top CAZyme Families