Cluster: HRGMv2_3185_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3185
- CGC Family ID: CGCFAM_01314
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3185_8 | HRGMv2_3185_8_21 | 21573 | 22508 | - | 3.A.1.1.29 |
| TC | HRGMv2_3185_8 | HRGMv2_3185_8_22 | 22525 | 23478 | - | 3.A.1.1.10 |
| TF | HRGMv2_3185_8 | HRGMv2_3185_8_23 | 23774 | 24856 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_3185_8 | HRGMv2_3185_8_24 | 24853 | 26625 | + | 9.B.33.1.1 |
| CAZyme | HRGMv2_3185_8 | HRGMv2_3185_8_25 | 26738 | 28099 | + | GH29 |
Gene ID: HRGMv2_3185_8_21
Type: TC
Location: 21573 - 22508 (-)
Type: TC
Location: 21573 - 22508 (-)
Gene ID: HRGMv2_3185_8_22
Type: TC
Location: 22525 - 23478 (-)
Type: TC
Location: 22525 - 23478 (-)
Gene ID: HRGMv2_3185_8_23
Type: TF
Location: 23774 - 24856 (+)
Type: TF
Location: 23774 - 24856 (+)
Gene ID: HRGMv2_3185_8_24
Type: TC
Location: 24853 - 26625 (+)
Type: TC
Location: 24853 - 26625 (+)
Gene ID: HRGMv2_3185_8_25
Type: CAZyme
Location: 26738 - 28099 (+)
Type: CAZyme
Location: 26738 - 28099 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp905214345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.