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Cluster: HRGMv2_3185_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3185_13 HRGMv2_3185_13_19 19613 20323 + 3.A.1.125.2
TC HRGMv2_3185_13 HRGMv2_3185_13_20 20324 24325 + 3.A.1.137.2
pfam HRGMv2_3185_13 HRGMv2_3185_13_21 24551 25489 + IU_nuc_hydro
TF HRGMv2_3185_13 HRGMv2_3185_13_22 25734 26192 + MarR
TC HRGMv2_3185_13 HRGMv2_3185_13_23 26221 27978 + 3.A.1.135.5
TC HRGMv2_3185_13 HRGMv2_3185_13_24 27978 29903 + 3.A.1.135.5
CAZyme HRGMv2_3185_13 HRGMv2_3185_13_25 30147 30905 + CBM13
Gene ID: HRGMv2_3185_13_19
Type: TC
Location: 19613 - 20323 (+)
Gene ID: HRGMv2_3185_13_20
Type: TC
Location: 20324 - 24325 (+)
Gene ID: HRGMv2_3185_13_21
Type: pfam
Location: 24551 - 25489 (+)
Gene ID: HRGMv2_3185_13_22
Type: TF
Location: 25734 - 26192 (+)
Gene ID: HRGMv2_3185_13_23
Type: TC
Location: 26221 - 27978 (+)
Gene ID: HRGMv2_3185_13_24
Type: TC
Location: 27978 - 29903 (+)
Gene ID: HRGMv2_3185_13_25
Type: CAZyme
Location: 30147 - 30905 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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