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Cluster: HRGMv2_3185_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3185_13 HRGMv2_3185_13_2 620 1822 + 3.A.5.2.2
TC HRGMv2_3185_13 HRGMv2_3185_13_3 1837 3435 + 3.A.5.10.1
TC HRGMv2_3185_13 HRGMv2_3185_13_4 3398 4918 + 3.A.5.10.1
pfam HRGMv2_3185_13 HRGMv2_3185_13_5 4915 5373 + Sec-ASP3
TC HRGMv2_3185_13 HRGMv2_3185_13_6 5351 7675 + 3.A.5.10.1
CAZyme HRGMv2_3185_13 HRGMv2_3185_13_7 7694 9193 + GT4
NULL(UNKNOWN) HRGMv2_3185_13 HRGMv2_3185_13_8 9163 10512 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3185_13 HRGMv2_3185_13_9 10792 11553 + GT26
Gene ID: HRGMv2_3185_13_2
Type: TC
Location: 620 - 1822 (+)
Gene ID: HRGMv2_3185_13_3
Type: TC
Location: 1837 - 3435 (+)
Gene ID: HRGMv2_3185_13_4
Type: TC
Location: 3398 - 4918 (+)
Gene ID: HRGMv2_3185_13_5
Type: pfam
Location: 4915 - 5373 (+)
Gene ID: HRGMv2_3185_13_6
Type: TC
Location: 5351 - 7675 (+)
Gene ID: HRGMv2_3185_13_7
Type: CAZyme
Location: 7694 - 9193 (+)
Gene ID: HRGMv2_3185_13_8
Type:
Location: 9163 - 10512 (+)
Gene ID: HRGMv2_3185_13_9
Type: CAZyme
Location: 10792 - 11553 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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