PROTEIN: HRGMv2_3185_13_8
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Protein File & Metadata
Source:
HRGMv2_3185_13_8.pdb
Genome ID:
Protein ID:
HRGMv2_3185_13_8
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Protein Sequence
MGRSAAQDNV VLLFDAYHDA SRRLHESFRQ AGCDYPAVVI EDNGFLPETV QSVYSYFLGD 60 YRNAPGAGTR PRYFNEIEVP DFWEISSTNL MGKISDMNRE RARIFYAQPS NKRWVQAVDW 120 LDESGTVRYS DHYNRWGAVY ARTTFNSKGE RVLRSYFAPD GREVIVENFV TKDIILNEEK 180 AVRIFNNKTE FVAHFLHCAG YDHSRLFFNS LATPFFVSCQ LGGEKSDVLF WQEPITDSIP 240 GNMQMILDGR APRTGQIYVQ SRKAYRRLME LGADPALVQQ KGFVYDFRRP NGHRAQALIC 300 TNSDQLEQCE TLVTALPDVQ FHIAALTEMS SKLMGMEKHP NVHLYPGVKT AMLNDLFRRC 360 DLYLDINHGN EIVSAVQRAF LNNQVIFAFA NTKHNEAVMD EAHIYAPEKA SDMIEAIRRT 420 LTGADGFDQA LAAQHTAALA EERDAFLHI 449
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FUW8-F1-model_v4 | 10 | 449 | 1 | 446 | 0.8835 |
0.9188 |
| AF-Q2FUW3-F1-model_v4 | 8 | 449 | 1 | 510 | 0.6002 |
0.6704 |
| AF-Q2G0L2-F1-model_v4 | 9 | 449 | 1 | 492 | 0.5879 |
0.6488 |
| AF-Q2G0L3-F1-model_v4 | 9 | 449 | 1 | 488 | 0.5748 |
0.6301 |
| AF-Q2FUW7-F1-model_v4 | 8 | 449 | 1 | 495 | 0.5714 |
0.6336 |
| AF-O05083-F1-model_v4 | 5 | 449 | 1 | 351 | 0.5498 |
0.6363 |
| AF-Q2G255-F1-model_v4 | 8 | 449 | 1 | 365 | 0.5156 |
0.5973 |
| AF-A0A0N4UIH0-F1-model_v4 | 1 | 449 | 2 | 375 | 0.5021 |
0.5972 |
| AF-A0A3P7ERJ7-F1-model_v4 | 1 | 449 | 5 | 376 | 0.4978 |
0.6003 |
| AF-A0A0H5S972-F1-model_v4 | 1 | 449 | 5 | 376 | 0.4971 |
0.6024 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5P6VTZ8-F1-model_v4 | GT8 | 4 | 449 | 3 | 446 | 0.9413 |
0.957 |
| AF-C4ZG31-F1-model_v4 | GT8 | 6 | 449 | 10 | 454 | 0.9329 |
0.961 |
| AF-A0A7L9VSV5-F1-model_v4 | GT8 | 10 | 449 | 1 | 436 | 0.932 |
0.9603 |
| AF-A0A0D4CIU0-F1-model_v4 | GT8 | 10 | 449 | 1 | 436 | 0.9314 |
0.9597 |
| AF-F2I915-F1-model_v4 | GT8 | 10 | 449 | 1 | 443 | 0.9312 |
0.9538 |
| AF-A0A6P1EQH6-F1-model_v4 | GT8 | 10 | 449 | 1 | 436 | 0.9311 |
0.9594 |
| AF-A0A7D9N524-F1-model_v4 | GT8 | 10 | 449 | 1 | 436 | 0.931 |
0.9593 |
| AF-A0A1V0GGE3-F1-model_v4 | GT8 | 10 | 449 | 1 | 438 | 0.9309 |
0.9533 |
| AF-A0A2X3YJ50-F1-model_v4 | GT8 | 10 | 449 | 1 | 438 | 0.9307 |
0.9531 |
| AF-A0A412A7S3-F1-model_v4 | GT8 | 10 | 449 | 1 | 438 | 0.9306 |
0.953 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5P6VTZ8 | GT8 | 4 | 449 | 3 | 446 | 0.9413 |
0.957 |
| C4ZG31 | GT8 | 6 | 449 | 10 | 454 | 0.9329 |
0.961 |
| F2I915 | GT8 | 10 | 449 | 1 | 443 | 0.9312 |
0.9538 |
| J3AIZ9 | GT8 | 10 | 449 | 1 | 438 | 0.9289 |
0.9533 |
| A0A3G9J7U1 | GT8 | 10 | 449 | 1 | 437 | 0.9268 |
0.9524 |
| A0A252CEU4 | GT8 | 10 | 449 | 1 | 447 | 0.9261 |
0.9529 |
| A0A2T4TCV6 | GT8 | 10 | 449 | 1 | 442 | 0.926 |
0.9571 |
| A0A7T7NYN3 | GT8 | 10 | 449 | 1 | 439 | 0.9252 |
0.9479 |
| A0A8E2VFN6 | GT8 | 10 | 449 | 1 | 438 | 0.9249 |
0.9478 |
| A0A428GIL4 | GT8 | 10 | 449 | 1 | 442 | 0.9243 |
0.9462 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5e9u-assembly2.cif.gz_H | 10 | 449 | 1 | 441 | 0.8935 |
0.9214 |
| 6oyc-assembly4.cif.gz_A | 9 | 449 | 1 | 495 | 0.6558 |
0.7226 |
| 6lnw-assembly1.cif.gz_A | 9 | 449 | 1 | 484 | 0.6476 |
0.7123 |
| 5vae-assembly5.cif.gz_E | 9 | 449 | 1 | 502 | 0.6447 |
0.7176 |
| 5vae-assembly5.cif.gz_G | 9 | 449 | 1 | 502 | 0.6437 |
0.717 |
| 5vae-assembly1.cif.gz_A | 9 | 449 | 1 | 503 | 0.6407 |
0.7175 |
| 7ec7-assembly1.cif.gz_A | 9 | 449 | 1 | 492 | 0.6078 |
0.6709 |
| 7ec7-assembly2.cif.gz_B | 9 | 449 | 1 | 490 | 0.5946 |
0.6552 |
| 5vaf-assembly4.cif.gz_D | 9 | 449 | 1 | 504 | 0.589 |
0.6564 |
| 5vaf-assembly1.cif.gz_A | 9 | 449 | 1 | 503 | 0.5855 |
0.6533 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0S4NND9-F1-model_v4 | 10 | 449 | 1 | 435 | 0.9163 |
0.9468 |
| AF-Q3S2Y1-F1-model_v4 | 10 | 449 | 1 | 439 | 0.9137 |
0.9383 |
| AF-Q79T00-F1-model_v4 | 10 | 449 | 1 | 441 | 0.9049 |
0.9361 |
| AF-A0A0H2UR90-F1-model_v4 | 10 | 449 | 1 | 439 | 0.8908 |
0.9211 |
| AF-A1C3M0-F1-model_v4 | 10 | 449 | 1 | 434 | 0.8871 |
0.9215 |
| AF-Q9AET9-F1-model_v4 | 9 | 449 | 1 | 515 | 0.6422 |
0.7221 |
| AF-Q2FUW3-F1-model_v4 | 8 | 449 | 1 | 510 | 0.6002 |
0.6704 |
| AF-A0A0H2WWV6-F1-model_v4 | 5 | 449 | 1 | 490 | 0.5878 |
0.6415 |
| AF-Q9AET5-F1-model_v4 | 8 | 449 | 1 | 496 | 0.5681 |
0.6325 |
| AF-Q3S2Y2-F1-model_v4 | 8 | 449 | 1 | 496 | 0.5672 |
0.6317 |