Cluster: HRGMv2_3185_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3185
- CGC Family ID: CGCFAM_00185
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3185_3 | HRGMv2_3185_3_79 | 77255 | 78292 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_3185_3 | HRGMv2_3185_3_80 | 78298 | 80127 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3185_3 | HRGMv2_3185_3_81 | 80146 | 81039 | - | GT2 |
| CAZyme | HRGMv2_3185_3 | HRGMv2_3185_3_82 | 81041 | 81748 | - | GT111 |
| TC | HRGMv2_3185_3 | HRGMv2_3185_3_83 | 81968 | 83863 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_3185_3_79
Type: CAZyme
Location: 77255 - 78292 (-)
Type: CAZyme
Location: 77255 - 78292 (-)
Gene ID: HRGMv2_3185_3_80
Type:
Location: 78298 - 80127 (-)
Type:
Location: 78298 - 80127 (-)
Gene ID: HRGMv2_3185_3_81
Type: CAZyme
Location: 80146 - 81039 (-)
Type: CAZyme
Location: 80146 - 81039 (-)
Gene ID: HRGMv2_3185_3_82
Type: CAZyme
Location: 81041 - 81748 (-)
Type: CAZyme
Location: 81041 - 81748 (-)
Gene ID: HRGMv2_3185_3_83
Type: TC
Location: 81968 - 83863 (-)
Type: TC
Location: 81968 - 83863 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp905214345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.