Cluster: HRGMv2_3185_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3185
- CGC Family ID: CGCFAM_00233
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3185_6 | HRGMv2_3185_6_119 | 127902 | 129347 | + | 9.B.18.1.2 |
| TC | HRGMv2_3185_6 | HRGMv2_3185_6_120 | 129390 | 129791 | + | 1.E.14.1.7 |
| TC | HRGMv2_3185_6 | HRGMv2_3185_6_121 | 129784 | 130476 | + | 2.A.122.1.6 |
| TF | HRGMv2_3185_6 | HRGMv2_3185_6_122 | 130550 | 131260 | + | LytTR |
| pfam | HRGMv2_3185_6 | HRGMv2_3185_6_123 | 131257 | 132540 | + | HATPase_c_5 |
| CAZyme | HRGMv2_3185_6 | HRGMv2_3185_6_124 | 132788 | 135670 | + | GH3 |
Gene ID: HRGMv2_3185_6_119
Type: TC
Location: 127902 - 129347 (+)
Type: TC
Location: 127902 - 129347 (+)
Gene ID: HRGMv2_3185_6_120
Type: TC
Location: 129390 - 129791 (+)
Type: TC
Location: 129390 - 129791 (+)
Gene ID: HRGMv2_3185_6_121
Type: TC
Location: 129784 - 130476 (+)
Type: TC
Location: 129784 - 130476 (+)
Gene ID: HRGMv2_3185_6_122
Type: TF
Location: 130550 - 131260 (+)
Type: TF
Location: 130550 - 131260 (+)
Gene ID: HRGMv2_3185_6_123
Type: pfam
Location: 131257 - 132540 (+)
Type: pfam
Location: 131257 - 132540 (+)
Gene ID: HRGMv2_3185_6_124
Type: CAZyme
Location: 132788 - 135670 (+)
Type: CAZyme
Location: 132788 - 135670 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp905214345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.