Cluster: HRGMv2_3185_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3185
- CGC Family ID: CGCFAM_02189
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3185_3 | HRGMv2_3185_3_47 | 42258 | 43649 | + | 2.A.25.1.5 |
| STP | HRGMv2_3185_3 | HRGMv2_3185_3_48 | 43747 | 44676 | - | PfkB |
| TC | HRGMv2_3185_3 | HRGMv2_3185_3_49 | 44917 | 45828 | + | 2.A.115.1.1 |
| TF | HRGMv2_3185_3 | HRGMv2_3185_3_50 | 45902 | 46654 | - | HTH_3 |
| peptidase | HRGMv2_3185_3 | HRGMv2_3185_3_51 | 46808 | 48205 | - | M18.UPW |
| CAZyme | HRGMv2_3185_3 | HRGMv2_3185_3_52 | 48269 | 48877 | - | GH23 |
Gene ID: HRGMv2_3185_3_47
Type: TC
Location: 42258 - 43649 (+)
Type: TC
Location: 42258 - 43649 (+)
Gene ID: HRGMv2_3185_3_48
Type: STP
Location: 43747 - 44676 (-)
Type: STP
Location: 43747 - 44676 (-)
Gene ID: HRGMv2_3185_3_49
Type: TC
Location: 44917 - 45828 (+)
Type: TC
Location: 44917 - 45828 (+)
Gene ID: HRGMv2_3185_3_50
Type: TF
Location: 45902 - 46654 (-)
Type: TF
Location: 45902 - 46654 (-)
Gene ID: HRGMv2_3185_3_51
Type: peptidase
Location: 46808 - 48205 (-)
Type: peptidase
Location: 46808 - 48205 (-)
Gene ID: HRGMv2_3185_3_52
Type: CAZyme
Location: 48269 - 48877 (-)
Type: CAZyme
Location: 48269 - 48877 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp905214345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.