Cluster: HRGMv2_3185_CGC42
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3185
- CGC Family ID: CGCFAM_01647
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3185_16 | HRGMv2_3185_16_2 | 224 | 1012 | + | CE4 |
| NULL(UNKNOWN) | HRGMv2_3185_16 | HRGMv2_3185_16_3 | 1104 | 1640 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3185_16 | HRGMv2_3185_16_4 | 1676 | 2983 | + | GH13_20 |
| TC | HRGMv2_3185_16 | HRGMv2_3185_16_5 | 3026 | 3886 | + | 2.A.7.2.1 |
Gene ID: HRGMv2_3185_16_2
Type: CAZyme
Location: 224 - 1012 (+)
Type: CAZyme
Location: 224 - 1012 (+)
Gene ID: HRGMv2_3185_16_3
Type:
Location: 1104 - 1640 (+)
Type:
Location: 1104 - 1640 (+)
Gene ID: HRGMv2_3185_16_4
Type: CAZyme
Location: 1676 - 2983 (+)
Type: CAZyme
Location: 1676 - 2983 (+)
Gene ID: HRGMv2_3185_16_5
Type: TC
Location: 3026 - 3886 (+)
Type: TC
Location: 3026 - 3886 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp905214345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.