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Cluster: HRGMv2_3185_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3185_15 HRGMv2_3185_15_46 59050 60108 - GT2
CAZyme HRGMv2_3185_15 HRGMv2_3185_15_47 60084 61421 - GT4
CAZyme HRGMv2_3185_15 HRGMv2_3185_15_48 61403 62389 - GT2
CAZyme HRGMv2_3185_15 HRGMv2_3185_15_49 62428 63432 - GT2
CAZyme HRGMv2_3185_15 HRGMv2_3185_15_50 63512 64540 - GT2
CAZyme HRGMv2_3185_15 HRGMv2_3185_15_51 64537 65817 - GT4
NULL(UNKNOWN) HRGMv2_3185_15 HRGMv2_3185_15_52 65814 66773 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3185_15 HRGMv2_3185_15_53 66786 67781 - GT2
CAZyme HRGMv2_3185_15 HRGMv2_3185_15_54 67778 68887 - GT4
pfam HRGMv2_3185_15 HRGMv2_3185_15_55 68905 69777 - PPK2
TC HRGMv2_3185_15 HRGMv2_3185_15_56 69853 70179 - 2.A.78.1.1
TC HRGMv2_3185_15 HRGMv2_3185_15_57 70172 70843 - 2.A.78.1.1
Gene ID: HRGMv2_3185_15_46
Type: CAZyme
Location: 59050 - 60108 (-)
Gene ID: HRGMv2_3185_15_47
Type: CAZyme
Location: 60084 - 61421 (-)
Gene ID: HRGMv2_3185_15_48
Type: CAZyme
Location: 61403 - 62389 (-)
Gene ID: HRGMv2_3185_15_49
Type: CAZyme
Location: 62428 - 63432 (-)
Gene ID: HRGMv2_3185_15_50
Type: CAZyme
Location: 63512 - 64540 (-)
Gene ID: HRGMv2_3185_15_51
Type: CAZyme
Location: 64537 - 65817 (-)
Gene ID: HRGMv2_3185_15_52
Type:
Location: 65814 - 66773 (-)
Gene ID: HRGMv2_3185_15_53
Type: CAZyme
Location: 66786 - 67781 (-)
Gene ID: HRGMv2_3185_15_54
Type: CAZyme
Location: 67778 - 68887 (-)
Gene ID: HRGMv2_3185_15_55
Type: pfam
Location: 68905 - 69777 (-)
Gene ID: HRGMv2_3185_15_56
Type: TC
Location: 69853 - 70179 (-)
Gene ID: HRGMv2_3185_15_57
Type: TC
Location: 70172 - 70843 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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