PROTEIN: HRGMv2_3185_15_52
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3185_15_52.pdb
Genome ID:
Protein ID:
HRGMv2_3185_15_52
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MRILFVFDSV EAPAAANPRL GRRLAEVLAA QGHEVEILEL WDGTHAPPAV PGCVTHDLPF 60 ADEAAMNRAL ENGAAGGTPV PLRLVRLAAN PAAFSAAVRQ FALHAPRRVT AARKEMESLH 120 KKQPFDAVCA VAAPYRAVFA LEGARLPGAR KLLWQMDPYA ANESYRAPGG YDRERALLNA 180 LDHTFITAQA REDYAPGGPL ESCAGKVSEL GFPSLLPAVR EDPDPTLCAF CGTLYPGMRT 240 PDALLELFPG LNKNLTLVMA GGGWESFAPQ RAKAQXXXXX XXXXXXXXXX XXXXXXXXXX 300 XXXXXXXXXA DPDAKGEPR 319
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5FAD9-F1-model_v4 | 1 | 285 | 1 | 327 | 0.55 |
0.623 |
| AF-Q2G290-F1-model_v4 | 1 | 285 | 1 | 357 | 0.5438 |
0.64 |
| AF-P27127-F1-model_v4 | 1 | 285 | 1 | 326 | 0.5395 |
0.6168 |
| AF-Q06994-F1-model_v4 | 1 | 285 | 1 | 328 | 0.5374 |
0.6144 |
| AF-A0A175WG89-F1-model_v4 | 1 | 285 | 9 | 396 | 0.5296 |
0.6814 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q48212-F1-model_v4 | GT4 | 1 | 275 | 2 | 207 | 0.6472 |
0.8046 |
| AF-A0A3Q9G2L1-F1-model_v4 | GT4 | 1 | 275 | 6 | 273 | 0.6222 |
0.6802 |
| AF-I3TCX0-F1-model_v4 | GT4 | 1 | 285 | 6 | 335 | 0.62 |
0.6934 |
| D1PHT6 | GT4 | 1 | 279 | 1 | 300 | 0.6028 |
0.6534 |
| AF-A0A1D7QB83-F1-model_v4 | GT4 | 1 | 285 | 4 | 335 | 0.5871 |
0.6781 |
| AF-B8I8C4-F1-model_v4 | GT4 | 1 | 285 | 2 | 386 | 0.5865 |
0.7086 |
| AF-T1SF07-F1-model_v4 | GT4 | 1 | 285 | 7 | 368 | 0.5849 |
0.7132 |
| AF-A0A0E3UNS9-F1-model_v4 | GT4 | 1 | 285 | 1 | 393 | 0.5845 |
0.7146 |
| AF-M1VK77-F1-model_v4 | GT4 | 1 | 285 | 7 | 367 | 0.5842 |
0.7124 |
| AF-A0A1P8VR31-F1-model_v4 | GT4 | 1 | 285 | 7 | 368 | 0.584 |
0.7103 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D1PHT6 | GT4 | 1 | 279 | 1 | 300 | 0.6028 |
0.6534 |
| T1SF07 | GT4 | 1 | 285 | 7 | 368 | 0.5849 |
0.7132 |
| A0A0E3UNS9 | GT4 | 1 | 285 | 1 | 393 | 0.5845 |
0.7146 |
| A0A9E9H5J7 | GT4 | 1 | 285 | 1 | 339 | 0.5821 |
0.6696 |
| F6AVN9 | GT4 | 1 | 285 | 1 | 363 | 0.5814 |
0.7052 |
| A0A3G8VTT2 | GT4 | 1 | 285 | 1 | 326 | 0.5796 |
0.6721 |
| A0A0K2GB85 | GT4 | 1 | 285 | 1 | 354 | 0.5786 |
0.6824 |
| A0A2K2FJX4 | GT4 | 1 | 285 | 2 | 392 | 0.5785 |
0.7051 |
| A0A843AKZ0 | GT4 | 1 | 285 | 1 | 358 | 0.5778 |
0.6731 |
| A0A9E7RV95 | GT4 | 1 | 285 | 1 | 279 | 0.5774 |
0.6312 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q48454-F1-model_v4 | 1 | 285 | 1 | 348 | 0.5685 |
0.6621 |
| AF-P27127-F1-model_v4 | 1 | 285 | 1 | 326 | 0.5395 |
0.6168 |
| AF-Q06994-F1-model_v4 | 1 | 285 | 1 | 328 | 0.5374 |
0.6144 |
| AF-A8GVJ7-F1-model_v4 | 1 | 283 | 2 | 339 | 0.5111 |
0.5867 |
| AF-Q1RI55-F1-model_v4 | 1 | 283 | 2 | 339 | 0.5107 |
0.5867 |