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Cluster: HRGMv2_3185_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3185_15 HRGMv2_3185_15_1 249 1655 + 4.A.1.2.13
CAZyme HRGMv2_3185_15 HRGMv2_3185_15_2 1698 3353 + GH13_29
CAZyme HRGMv2_3185_15 HRGMv2_3185_15_3 3487 5340 - GH13_4
STP HRGMv2_3185_15 HRGMv2_3185_15_4 5375 6316 - PfkB
CAZyme HRGMv2_3185_15 HRGMv2_3185_15_5 6347 8596 - GH36
TC HRGMv2_3185_15 HRGMv2_3185_15_6 8767 9603 - 3.A.1.1.34
TC HRGMv2_3185_15 HRGMv2_3185_15_7 9607 10491 - 3.A.1.1.25
TC HRGMv2_3185_15 HRGMv2_3185_15_8 10504 11787 - 3.A.1.1.44
Gene ID: HRGMv2_3185_15_1
Type: TC
Location: 249 - 1655 (+)
Gene ID: HRGMv2_3185_15_2
Type: CAZyme
Location: 1698 - 3353 (+)
Gene ID: HRGMv2_3185_15_3
Type: CAZyme
Location: 3487 - 5340 (-)
Gene ID: HRGMv2_3185_15_4
Type: STP
Location: 5375 - 6316 (-)
Gene ID: HRGMv2_3185_15_5
Type: CAZyme
Location: 6347 - 8596 (-)
Gene ID: HRGMv2_3185_15_6
Type: TC
Location: 8767 - 9603 (-)
Gene ID: HRGMv2_3185_15_7
Type: TC
Location: 9607 - 10491 (-)
Gene ID: HRGMv2_3185_15_8
Type: TC
Location: 10504 - 11787 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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