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Cluster: HRGMv2_3185_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3185_13 HRGMv2_3185_13_29 34494 36215 + 8.A.59.2.1
STP HRGMv2_3185_13 HRGMv2_3185_13_30 36202 37188 + Peripla_BP_1
pfam HRGMv2_3185_13 HRGMv2_3185_13_31 37422 38735 + Peripla_BP_4 | Peripla_BP_7
TC HRGMv2_3185_13 HRGMv2_3185_13_32 38902 40410 + 3.A.1.2.3
TC HRGMv2_3185_13 HRGMv2_3185_13_33 40427 42082 + 3.A.1.2.3
pfam HRGMv2_3185_13 HRGMv2_3185_13_34 42234 42809 - Flavin_Reduct
CAZyme HRGMv2_3185_13 HRGMv2_3185_13_35 42806 43780 - GT2
Gene ID: HRGMv2_3185_13_29
Type: TC
Location: 34494 - 36215 (+)
Gene ID: HRGMv2_3185_13_30
Type: STP
Location: 36202 - 37188 (+)
Gene ID: HRGMv2_3185_13_31
Type: pfam
Location: 37422 - 38735 (+)
Gene ID: HRGMv2_3185_13_32
Type: TC
Location: 38902 - 40410 (+)
Gene ID: HRGMv2_3185_13_33
Type: TC
Location: 40427 - 42082 (+)
Gene ID: HRGMv2_3185_13_34
Type: pfam
Location: 42234 - 42809 (-)
Gene ID: HRGMv2_3185_13_35
Type: CAZyme
Location: 42806 - 43780 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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