Cluster: HRGMv2_3185_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3185
- CGC Family ID: CGCFAM_03285
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3185_4 | HRGMv2_3185_4_5 | 2783 | 3715 | - | GT81 |
| pfam | HRGMv2_3185_4 | HRGMv2_3185_4_6 | 3749 | 4942 | - | PS_pyruv_trans |
| CAZyme | HRGMv2_3185_4 | HRGMv2_3185_4_7 | 4980 | 7271 | - | GT2 | GT4 |
| CAZyme | HRGMv2_3185_4 | HRGMv2_3185_4_8 | 7295 | 8260 | - | GT2 |
| TC | HRGMv2_3185_4 | HRGMv2_3185_4_9 | 8443 | 10386 | - | 4.A.2.1.4 |
| TC | HRGMv2_3185_4 | HRGMv2_3185_4_10 | 10481 | 11593 | - | 3.A.1.1.26 |
Gene ID: HRGMv2_3185_4_5
Type: CAZyme
Location: 2783 - 3715 (-)
Type: CAZyme
Location: 2783 - 3715 (-)
Gene ID: HRGMv2_3185_4_6
Type: pfam
Location: 3749 - 4942 (-)
Type: pfam
Location: 3749 - 4942 (-)
Gene ID: HRGMv2_3185_4_7
Type: CAZyme
Location: 4980 - 7271 (-)
Type: CAZyme
Location: 4980 - 7271 (-)
Gene ID: HRGMv2_3185_4_8
Type: CAZyme
Location: 7295 - 8260 (-)
Type: CAZyme
Location: 7295 - 8260 (-)
Gene ID: HRGMv2_3185_4_9
Type: TC
Location: 8443 - 10386 (-)
Type: TC
Location: 8443 - 10386 (-)
Gene ID: HRGMv2_3185_4_10
Type: TC
Location: 10481 - 11593 (-)
Type: TC
Location: 10481 - 11593 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp905214345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.