Cluster: HRGMv2_3185_CGC49
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3185
- CGC Family ID: CGCFAM_00662
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3185_26 | HRGMv2_3185_26_10 | 8926 | 10302 | - | 2.A.66.1.32 |
| TC | HRGMv2_3185_26 | HRGMv2_3185_26_11 | 10517 | 12103 | - | 2.A.2.3.5 |
| CAZyme | HRGMv2_3185_26 | HRGMv2_3185_26_12 | 12264 | 15227 | - | GH3 |
| CAZyme | HRGMv2_3185_26 | HRGMv2_3185_26_13 | 15429 | 17360 | - | GH2 |
Gene ID: HRGMv2_3185_26_10
Type: TC
Location: 8926 - 10302 (-)
Type: TC
Location: 8926 - 10302 (-)
Gene ID: HRGMv2_3185_26_11
Type: TC
Location: 10517 - 12103 (-)
Type: TC
Location: 10517 - 12103 (-)
Gene ID: HRGMv2_3185_26_12
Type: CAZyme
Location: 12264 - 15227 (-)
Type: CAZyme
Location: 12264 - 15227 (-)
Gene ID: HRGMv2_3185_26_13
Type: CAZyme
Location: 15429 - 17360 (-)
Type: CAZyme
Location: 15429 - 17360 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp905214345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.