Cluster: HRGMv2_3185_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3185
- CGC Family ID: CGCFAM_02572
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3185_1 | HRGMv2_3185_1_160 | 207242 | 208594 | - | GH1 |
| TC | HRGMv2_3185_1 | HRGMv2_3185_1_161 | 208625 | 209512 | - | 3.A.1.1.29 |
| TC | HRGMv2_3185_1 | HRGMv2_3185_1_162 | 209531 | 210460 | - | 3.A.1.1.25 |
Gene ID: HRGMv2_3185_1_160
Type: CAZyme
Location: 207242 - 208594 (-)
Type: CAZyme
Location: 207242 - 208594 (-)
Gene ID: HRGMv2_3185_1_161
Type: TC
Location: 208625 - 209512 (-)
Type: TC
Location: 208625 - 209512 (-)
Gene ID: HRGMv2_3185_1_162
Type: TC
Location: 209531 - 210460 (-)
Type: TC
Location: 209531 - 210460 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp905214345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.