Genome Details
Selected Rep_genome_ID: HRGMv2_2909
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger_A
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2909 | 2,824,477 | 97.95% | 0% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2909_CGC3 | CGCFAM_00008 | Yes | 4 | 2 | |
| HRGMv2_2909_CGC21 | CGCFAM_00038 | Yes | 5 | 2 | |
| HRGMv2_2909_CGC6 | CGCFAM_00038 | Yes | 4 | 2 | |
| HRGMv2_2909_CGC5 | CGCFAM_00045 | Yes | 7 | 1 | alpha-glucan |
| HRGMv2_2909_CGC2 | CGCFAM_00073 | Yes | 15 | 10 | |
| HRGMv2_2909_CGC14 | CGCFAM_00092 | Yes | 5 | 1 | |
| HRGMv2_2909_CGC35 | CGCFAM_00258 | Yes | 10 | 1 | |
| HRGMv2_2909_CGC27 | CGCFAM_00391 | Yes | 4 | 1 | |
| HRGMv2_2909_CGC12 | CGCFAM_00430 | Yes | 7 | 3 | |
| HRGMv2_2909_CGC15 | CGCFAM_00694 | Yes | 4 | 1 | |
| HRGMv2_2909_CGC8 | CGCFAM_00764 | Yes | 4 | 1 | |
| HRGMv2_2909_CGC26 | CGCFAM_01129 | Yes | 8 | 4 | |
| HRGMv2_2909_CGC4 | CGCFAM_01348 | Yes | 5 | 1 | |
| HRGMv2_2909_CGC17 | CGCFAM_04199 | Yes | 5 | 1 | |
| HRGMv2_2909_CGC13 | CGCFAM_04207 | Yes | 5 | 1 | |
| HRGMv2_2909_CGC19 | CGCFAM_06184 | Yes | 7 | 2 | |
| HRGMv2_2909_CGC16 | CGCFAM_07771 | Yes | 7 | 1 | |
| HRGMv2_2909_CGC1 | CGCFAM_07904 | Yes | 3 | 1 | |
| HRGMv2_2909_CGC28 | CGCFAM_10163 | Yes | 5 | 2 | |
| HRGMv2_2909_CGC29 | CGCFAM_10224 | Yes | 6 | 2 |
Top CAZyme Families