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Cluster: HRGMv2_2909_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2909_26 HRGMv2_2909_26_18 17204 18160 - GT2
pfam HRGMv2_2909_26 HRGMv2_2909_26_19 18469 18732 + ATPase_gene1
pfam HRGMv2_2909_26 HRGMv2_2909_26_20 18756 19175 + ATP-synt_I
TC HRGMv2_2909_26 HRGMv2_2909_26_21 19183 19932 + 3.A.2.1.5
TC HRGMv2_2909_26 HRGMv2_2909_26_22 19997 20275 + 3.A.2.1.2
pfam HRGMv2_2909_26 HRGMv2_2909_26_23 20321 20827 + ATP-synt_B
pfam HRGMv2_2909_26 HRGMv2_2909_26_24 20824 21363 + OSCP
TC HRGMv2_2909_26 HRGMv2_2909_26_25 21376 22890 + 3.A.2.1.5
TC HRGMv2_2909_26 HRGMv2_2909_26_26 22910 23758 + 3.A.2.1.5
TC HRGMv2_2909_26 HRGMv2_2909_26_27 23798 24253 + 3.A.2.1.5
Gene ID: HRGMv2_2909_26_18
Type: CAZyme
Location: 17204 - 18160 (-)
Gene ID: HRGMv2_2909_26_19
Type: pfam
Location: 18469 - 18732 (+)
Gene ID: HRGMv2_2909_26_20
Type: pfam
Location: 18756 - 19175 (+)
Gene ID: HRGMv2_2909_26_21
Type: TC
Location: 19183 - 19932 (+)
Gene ID: HRGMv2_2909_26_22
Type: TC
Location: 19997 - 20275 (+)
Gene ID: HRGMv2_2909_26_23
Type: pfam
Location: 20321 - 20827 (+)
Gene ID: HRGMv2_2909_26_24
Type: pfam
Location: 20824 - 21363 (+)
Gene ID: HRGMv2_2909_26_25
Type: TC
Location: 21376 - 22890 (+)
Gene ID: HRGMv2_2909_26_26
Type: TC
Location: 22910 - 23758 (+)
Gene ID: HRGMv2_2909_26_27
Type: TC
Location: 23798 - 24253 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Gemmiger_A
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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