Cluster: HRGMv2_2909_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2909
- CGC Family ID: CGCFAM_10224
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2909_16 | HRGMv2_2909_16_64 | 63676 | 64884 | + | 2.A.103.1.8 |
| CAZyme | HRGMv2_2909_16 | HRGMv2_2909_16_65 | 65011 | 66057 | - | GH33 |
| TC | HRGMv2_2909_16 | HRGMv2_2909_16_66 | 66098 | 67375 | - | 2.A.1.33.1 |
| NULL(UNKNOWN) | HRGMv2_2909_16 | HRGMv2_2909_16_67 | 67534 | 69564 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2909_16 | HRGMv2_2909_16_68 | 69575 | 70987 | - | CE20 |
| TC | HRGMv2_2909_16 | HRGMv2_2909_16_69 | 71079 | 71993 | - | 8.A.5.1.4 |
Gene ID: HRGMv2_2909_16_64
Type: TC
Location: 63676 - 64884 (+)
Type: TC
Location: 63676 - 64884 (+)
Gene ID: HRGMv2_2909_16_65
Type: CAZyme
Location: 65011 - 66057 (-)
Type: CAZyme
Location: 65011 - 66057 (-)
Gene ID: HRGMv2_2909_16_66
Type: TC
Location: 66098 - 67375 (-)
Type: TC
Location: 66098 - 67375 (-)
Gene ID: HRGMv2_2909_16_67
Type:
Location: 67534 - 69564 (-)
Type:
Location: 67534 - 69564 (-)
Gene ID: HRGMv2_2909_16_68
Type: CAZyme
Location: 69575 - 70987 (-)
Type: CAZyme
Location: 69575 - 70987 (-)
Gene ID: HRGMv2_2909_16_69
Type: TC
Location: 71079 - 71993 (-)
Type: TC
Location: 71079 - 71993 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.