Cluster: HRGMv2_2909_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2909
- CGC Family ID: CGCFAM_00764
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2909_2 | HRGMv2_2909_2_132 | 128525 | 129109 | + | 4.F.1.1.7 |
| pfam | HRGMv2_2909_2 | HRGMv2_2909_2_133 | 129464 | 130858 | + | tRNA-synt_1e | DALR_2 | tRNA-synt_1g | tRNA-synt_1g | CysS_C |
| pfam | HRGMv2_2909_2 | HRGMv2_2909_2_134 | 130968 | 132146 | + | MFS_1 |
| CAZyme | HRGMv2_2909_2 | HRGMv2_2909_2_135 | 132255 | 135233 | + | GT39 |
Gene ID: HRGMv2_2909_2_132
Type: TC
Location: 128525 - 129109 (+)
Type: TC
Location: 128525 - 129109 (+)
Gene ID: HRGMv2_2909_2_133
Type: pfam
Location: 129464 - 130858 (+)
Type: pfam
Location: 129464 - 130858 (+)
Gene ID: HRGMv2_2909_2_134
Type: pfam
Location: 130968 - 132146 (+)
Type: pfam
Location: 130968 - 132146 (+)
Gene ID: HRGMv2_2909_2_135
Type: CAZyme
Location: 132255 - 135233 (+)
Type: CAZyme
Location: 132255 - 135233 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.