Cluster: HRGMv2_2909_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2909
- CGC Family ID: CGCFAM_07904
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2909_1 | HRGMv2_2909_1_104 | 93041 | 95113 | + | GH25 |
| TF | HRGMv2_2909_1 | HRGMv2_2909_1_105 | 95186 | 96310 | - | HTH_5 |
| TC | HRGMv2_2909_1 | HRGMv2_2909_1_106 | 96434 | 97705 | - | 2.A.1.21.22 |
Gene ID: HRGMv2_2909_1_104
Type: CAZyme
Location: 93041 - 95113 (+)
Type: CAZyme
Location: 93041 - 95113 (+)
Gene ID: HRGMv2_2909_1_105
Type: TF
Location: 95186 - 96310 (-)
Type: TF
Location: 95186 - 96310 (-)
Gene ID: HRGMv2_2909_1_106
Type: TC
Location: 96434 - 97705 (-)
Type: TC
Location: 96434 - 97705 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.