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Cluster: HRGMv2_2909_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2909_13 HRGMv2_2909_13_59 71887 72705 - CE1
STP HRGMv2_2909_13 HRGMv2_2909_13_60 73406 74746 + SBP_bac_1
TC HRGMv2_2909_13 HRGMv2_2909_13_61 74904 75800 + 3.A.1.1.36
TC HRGMv2_2909_13 HRGMv2_2909_13_62 75813 76658 + 3.A.1.1.34
CAZyme HRGMv2_2909_13 HRGMv2_2909_13_63 76762 79020 + GH3
pfam HRGMv2_2909_13 HRGMv2_2909_13_64 79060 80259 + MFS_1
CAZyme HRGMv2_2909_13 HRGMv2_2909_13_65 80256 83282 + GH2
CAZyme HRGMv2_2909_13 HRGMv2_2909_13_66 83352 85676 + GH65
Gene ID: HRGMv2_2909_13_59
Type: CAZyme
Location: 71887 - 72705 (-)
Gene ID: HRGMv2_2909_13_60
Type: STP
Location: 73406 - 74746 (+)
Gene ID: HRGMv2_2909_13_61
Type: TC
Location: 74904 - 75800 (+)
Gene ID: HRGMv2_2909_13_62
Type: TC
Location: 75813 - 76658 (+)
Gene ID: HRGMv2_2909_13_63
Type: CAZyme
Location: 76762 - 79020 (+)
Gene ID: HRGMv2_2909_13_64
Type: pfam
Location: 79060 - 80259 (+)
Gene ID: HRGMv2_2909_13_65
Type: CAZyme
Location: 80256 - 83282 (+)
Gene ID: HRGMv2_2909_13_66
Type: CAZyme
Location: 83352 - 85676 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Gemmiger_A
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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