Cluster: HRGMv2_2909_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2909
- CGC Family ID: CGCFAM_00038
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2909_10 | HRGMv2_2909_10_99 | 103892 | 105052 | - | GT4 |
| TC | HRGMv2_2909_10 | HRGMv2_2909_10_100 | 105141 | 105884 | - | 3.A.1.103.1 |
| TC | HRGMv2_2909_10 | HRGMv2_2909_10_101 | 105900 | 107354 | - | 3.A.1.103.1 |
| CAZyme | HRGMv2_2909_10 | HRGMv2_2909_10_102 | 107539 | 108690 | - | GT4 |
| TC | HRGMv2_2909_10 | HRGMv2_2909_10_103 | 108687 | 110078 | - | 9.B.18.1.1 |
Gene ID: HRGMv2_2909_10_99
Type: CAZyme
Location: 103892 - 105052 (-)
Type: CAZyme
Location: 103892 - 105052 (-)
Gene ID: HRGMv2_2909_10_100
Type: TC
Location: 105141 - 105884 (-)
Type: TC
Location: 105141 - 105884 (-)
Gene ID: HRGMv2_2909_10_101
Type: TC
Location: 105900 - 107354 (-)
Type: TC
Location: 105900 - 107354 (-)
Gene ID: HRGMv2_2909_10_102
Type: CAZyme
Location: 107539 - 108690 (-)
Type: CAZyme
Location: 107539 - 108690 (-)
Gene ID: HRGMv2_2909_10_103
Type: TC
Location: 108687 - 110078 (-)
Type: TC
Location: 108687 - 110078 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.