Cluster: HRGMv2_2909_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2909
- CGC Family ID: CGCFAM_00694
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2909_6 | HRGMv2_2909_6_93 | 97789 | 99246 | + | 9.A.11.1.2 |
| pfam | HRGMv2_2909_6 | HRGMv2_2909_6_94 | 99243 | 100232 | + | Spore_permease |
| NULL(UNKNOWN) | HRGMv2_2909_6 | HRGMv2_2909_6_95 | 100232 | 101341 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2909_6 | HRGMv2_2909_6_96 | 101575 | 102762 | - | GT4 |
Gene ID: HRGMv2_2909_6_93
Type: TC
Location: 97789 - 99246 (+)
Type: TC
Location: 97789 - 99246 (+)
Gene ID: HRGMv2_2909_6_94
Type: pfam
Location: 99243 - 100232 (+)
Type: pfam
Location: 99243 - 100232 (+)
Gene ID: HRGMv2_2909_6_95
Type:
Location: 100232 - 101341 (+)
Type:
Location: 100232 - 101341 (+)
Gene ID: HRGMv2_2909_6_96
Type: CAZyme
Location: 101575 - 102762 (-)
Type: CAZyme
Location: 101575 - 102762 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.