Cluster: HRGMv2_2909_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2909
- CGC Family ID: CGCFAM_00092
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2909_5 | HRGMv2_2909_5_83 | 88538 | 89425 | + | 3.A.1.1.18 |
| TC | HRGMv2_2909_5 | HRGMv2_2909_5_84 | 89438 | 90325 | + | 3.A.1.1.25 |
| pfam | HRGMv2_2909_5 | HRGMv2_2909_5_85 | 90336 | 90539 | + | DUF6903 |
| CAZyme | HRGMv2_2909_5 | HRGMv2_2909_5_86 | 90558 | 92723 | + | GH112 |
| TC | HRGMv2_2909_5 | HRGMv2_2909_5_87 | 92960 | 94744 | + | 2.A.58.2.2 |
Gene ID: HRGMv2_2909_5_83
Type: TC
Location: 88538 - 89425 (+)
Type: TC
Location: 88538 - 89425 (+)
Gene ID: HRGMv2_2909_5_84
Type: TC
Location: 89438 - 90325 (+)
Type: TC
Location: 89438 - 90325 (+)
Gene ID: HRGMv2_2909_5_85
Type: pfam
Location: 90336 - 90539 (+)
Type: pfam
Location: 90336 - 90539 (+)
Gene ID: HRGMv2_2909_5_86
Type: CAZyme
Location: 90558 - 92723 (+)
Type: CAZyme
Location: 90558 - 92723 (+)
Gene ID: HRGMv2_2909_5_87
Type: TC
Location: 92960 - 94744 (+)
Type: TC
Location: 92960 - 94744 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.