Cluster: HRGMv2_2909_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2909
- CGC Family ID: CGCFAM_00038
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2909_2 | HRGMv2_2909_2_57 | 48383 | 49768 | + | 9.B.18.1.1 |
| CAZyme | HRGMv2_2909_2 | HRGMv2_2909_2_58 | 49765 | 50880 | + | GT4 |
| pfam | HRGMv2_2909_2 | HRGMv2_2909_2_59 | 50900 | 52225 | + | Wzy_C |
| CAZyme | HRGMv2_2909_2 | HRGMv2_2909_2_60 | 52247 | 53353 | + | GT4 |
Gene ID: HRGMv2_2909_2_57
Type: TC
Location: 48383 - 49768 (+)
Type: TC
Location: 48383 - 49768 (+)
Gene ID: HRGMv2_2909_2_58
Type: CAZyme
Location: 49765 - 50880 (+)
Type: CAZyme
Location: 49765 - 50880 (+)
Gene ID: HRGMv2_2909_2_59
Type: pfam
Location: 50900 - 52225 (+)
Type: pfam
Location: 50900 - 52225 (+)
Gene ID: HRGMv2_2909_2_60
Type: CAZyme
Location: 52247 - 53353 (+)
Type: CAZyme
Location: 52247 - 53353 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.