Cluster: HRGMv2_2909_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2909
- CGC Family ID: CGCFAM_04199
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2909_8 | HRGMv2_2909_8_68 | 67402 | 69579 | + | CBM66 |
| sulfatase | HRGMv2_2909_8 | HRGMv2_2909_8_69 | 69576 | 70970 | + | S1_27 |
| TC | HRGMv2_2909_8 | HRGMv2_2909_8_70 | 71038 | 71961 | + | 3.A.1.1.10 |
| TC | HRGMv2_2909_8 | HRGMv2_2909_8_71 | 71980 | 72867 | + | 3.A.1.1.10 |
| TC | HRGMv2_2909_8 | HRGMv2_2909_8_72 | 72919 | 74496 | + | 3.A.1.1.10 |
Gene ID: HRGMv2_2909_8_68
Type: CAZyme
Location: 67402 - 69579 (+)
Type: CAZyme
Location: 67402 - 69579 (+)
Gene ID: HRGMv2_2909_8_69
Type: sulfatase
Location: 69576 - 70970 (+)
Type: sulfatase
Location: 69576 - 70970 (+)
Gene ID: HRGMv2_2909_8_70
Type: TC
Location: 71038 - 71961 (+)
Type: TC
Location: 71038 - 71961 (+)
Gene ID: HRGMv2_2909_8_71
Type: TC
Location: 71980 - 72867 (+)
Type: TC
Location: 71980 - 72867 (+)
Gene ID: HRGMv2_2909_8_72
Type: TC
Location: 72919 - 74496 (+)
Type: TC
Location: 72919 - 74496 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.