Cluster: HRGMv2_2909_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2909
- CGC Family ID: CGCFAM_10163
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2909_16 | HRGMv2_2909_16_1 | 142 | 1554 | + | CE20 |
| NULL(UNKNOWN) | HRGMv2_2909_16 | HRGMv2_2909_16_2 | 1564 | 3606 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2909_16 | HRGMv2_2909_16_3 | 3549 | 3749 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2909_16 | HRGMv2_2909_16_4 | 3777 | 4637 | + | 2.A.119.2.1 |
| CAZyme | HRGMv2_2909_16 | HRGMv2_2909_16_5 | 4785 | 5912 | + | CE9 |
Gene ID: HRGMv2_2909_16_1
Type: CAZyme
Location: 142 - 1554 (+)
Type: CAZyme
Location: 142 - 1554 (+)
Gene ID: HRGMv2_2909_16_2
Type:
Location: 1564 - 3606 (+)
Type:
Location: 1564 - 3606 (+)
Gene ID: HRGMv2_2909_16_3
Type:
Location: 3549 - 3749 (+)
Type:
Location: 3549 - 3749 (+)
Gene ID: HRGMv2_2909_16_4
Type: TC
Location: 3777 - 4637 (+)
Type: TC
Location: 3777 - 4637 (+)
Gene ID: HRGMv2_2909_16_5
Type: CAZyme
Location: 4785 - 5912 (+)
Type: CAZyme
Location: 4785 - 5912 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.