PROTEIN: HRGMv2_2909_16_2
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Protein File & Metadata
Source:
HRGMv2_2909_16_2.pdb
Genome ID:
Protein ID:
HRGMv2_2909_16_2
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Protein Sequence
MEKRFLYAFR FCCDPAFNGA EALDELCAFI RQADIDDVIV FANAQELNTG HMTDAEQQEW 60 LAYIRQVKQR VEPLGCTVSI NHWNTLMHAD LGRKPRPGQN FRPMVDVEGN AAAICVCPVD 120 EEWRAYYAKL CAAYAQTQPF LLWVEDDFRL HNHAPLVWGG CFCEEHMRLY SERAGKKLTR 180 REFLAGVLQP GEPHPYRKIW LDISRETMVE NARRIGAAVH SRAPRARVGL MSSVPSAHAA 240 EGRDWAGILR GLSGPDVPCA DRIHLPGYIE PTPSRYLCDF NAVSMLTRAF LPEGTEVYPE 300 LENFPFTRFS KSQRFTRFQL LAALPLDMAG ITLDLYELSG SGVDPEEGYE GVLRETKHYL 360 QAMTEQGVFH LPAAGVRVMV SPDSSYTLHT GEGKHMEELY PAETLFASLL PAYGIPMAYC 420 TDPGVQGQVV AVSGQYLRNL NAGQIEALFR GNFVILDGAA AETLFQMGLG RLANLEDMRW 480 MPMHGGEFSF EQVADGAVYC GKPQNRASTL FWVSDALDIR YGEGARPVTQ FCDAARRPTA 540 PALTLATPGV LVFPYGRYPD WPSLPHGFFH TLRQALFQQA LRGAQGVEVP PCLVGAPYLE 600 PYYYQTGGDG YLYVVNASTD PCARLTLELG GRELAAVQVY ASTGSGWQTA PFERKGSQAV 660 LQCALPSMET ALLRLEGAAR 680
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GP41-F1-model_v4 | 1 | 677 | 9 | 685 | 0.7368 |
0.7606 |
| AF-Q55EN4-F1-model_v4 | 1 | 679 | 137 | 959 | 0.5977 |
0.7068 |
| AF-X8F7S3-F1-model_v4 | 1 | 678 | 1 | 432 | 0.5561 |
0.6983 |
| AF-U7PSF6-F1-model_v4 | 1 | 679 | 9 | 725 | 0.5525 |
0.6839 |
| AF-A0A1D6K353-F1-model_v4 | 1 | 680 | 84 | 529 | 0.5074 |
0.6796 |
| AF-A0A0R0GWB3-F1-model_v4 | 1 | 666 | 73 | 568 | 0.4952 |
0.6211 |
| AF-A0A0P0X7C2-F1-model_v4 | 1 | 669 | 171 | 673 | 0.4585 |
0.617 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9E8FIW7 | GH0 | 1 | 679 | 3 | 701 | 0.773 |
0.8026 |
| A0A8J8MNE5 | GH151 | 1 | 680 | 1 | 681 | 0.7516 |
0.7706 |
| AF-A0A806K1B8-F1-model_v4 | GH0 | 1 | 679 | 11 | 705 | 0.7463 |
0.7807 |
| AF-A0A097ANA4-F1-model_v4 | GH5_19 | 1 | 679 | 3 | 627 | 0.7442 |
0.7918 |
| AF-G2MUR1-F1-model_v4 | GH5_19 | 1 | 679 | 3 | 627 | 0.744 |
0.7916 |
| AF-D3T580-F1-model_v4 | GH5_19 | 1 | 679 | 1 | 627 | 0.7439 |
0.7893 |
| AF-A0A0U4X0M2-F1-model_v4 | GH151 | 1 | 679 | 14 | 734 | 0.7438 |
0.788 |
| AF-E8US34-F1-model_v4 | GH5_19 | 1 | 679 | 3 | 627 | 0.7437 |
0.7914 |
| AF-B0K7Y4-F1-model_v4 | GH5_19 | 1 | 679 | 3 | 627 | 0.7435 |
0.7911 |
| AF-B0K2C4-F1-model_v4 | GH5_19 | 1 | 679 | 2 | 627 | 0.7433 |
0.7898 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A3D9HUQ2 | GH151 | 1 | 680 | 4 | 693 | 0.762 |
0.7875 |
| K0JCW6 | GH151 | 3 | 679 | 1 | 660 | 0.7604 |
0.7883 |
| A0A7L9TQF5 | GH151 | 1 | 677 | 5 | 674 | 0.758 |
0.782 |
| A0A5B9W462 | GH151 | 1 | 677 | 23 | 723 | 0.7572 |
0.7981 |
| A0A416HGB7 | GH42 | 1 | 675 | 3 | 692 | 0.7571 |
0.7851 |
| G8PV77 | GH151 | 1 | 679 | 2 | 675 | 0.7567 |
0.7766 |
| G8QVY8 | GH151 | 1 | 679 | 1 | 663 | 0.7558 |
0.7815 |
| A0A3G9JB12 | GH151 | 1 | 676 | 2 | 676 | 0.7544 |
0.7762 |
| A0A4Z0Y254 | GH151 | 1 | 679 | 1 | 668 | 0.7538 |
0.7783 |
| A0A1R0Z7A5 | GH42 | 1 | 676 | 3 | 726 | 0.7523 |
0.7962 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6tvk-assembly1.cif.gz_AAA | 3 | 679 | 1 | 660 | 0.7527 |
0.7806 |
| 6t6g-assembly2.cif.gz_EEE | 1 | 676 | 2 | 650 | 0.7412 |
0.7754 |
| 5e9a-assembly1.cif.gz_A | 1 | 677 | 8 | 679 | 0.74 |
0.7652 |
| 7omi-assembly2.cif.gz_FFF | 1 | 676 | 2 | 650 | 0.7396 |
0.7738 |
| 6t7g-assembly2.cif.gz_EEE | 1 | 676 | 2 | 648 | 0.7392 |
0.7744 |
| 6t7g-assembly1.cif.gz_CCC | 1 | 677 | 5 | 654 | 0.7392 |
0.7743 |
| 6t75-assembly1.cif.gz_BBB | 1 | 676 | 2 | 648 | 0.7385 |
0.7741 |
| 6t6g-assembly1.cif.gz_AAA | 1 | 676 | 8 | 655 | 0.7369 |
0.7749 |
| 7oms-assembly2.cif.gz_DDD | 1 | 677 | 4 | 650 | 0.7367 |
0.7731 |
| 6t5o-assembly1.cif.gz_AAA | 1 | 676 | 9 | 658 | 0.7357 |
0.7731 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P22795-F1-model_v4 | 2 | 678 | 1 | 592 | 0.799 |
0.8666 |
| AF-C8WV58-F1-model_v4 | 1 | 680 | 10 | 688 | 0.7455 |
0.7681 |
| AF-D5JGG0-F1-model_v4 | 1 | 678 | 4 | 665 | 0.7453 |
0.7737 |
| AF-Q9KI47-F1-model_v4 | 1 | 676 | 4 | 677 | 0.7404 |
0.7629 |
| AF-Q09HN2-F1-model_v4 | 1 | 676 | 4 | 676 | 0.7397 |
0.7628 |
| AF-Q9RFN0-F1-model_v4 | 1 | 677 | 3 | 668 | 0.7378 |
0.7639 |
| AF-Q0TUR6-F1-model_v4 | 1 | 676 | 9 | 689 | 0.7357 |
0.7624 |
| AF-P19668-F1-model_v4 | 1 | 678 | 2 | 668 | 0.7351 |
0.7626 |
| AF-C9S0R2-F1-model_v4 | 1 | 678 | 2 | 668 | 0.7348 |
0.7624 |
| AF-O07012-F1-model_v4 | 5 | 677 | 1 | 672 | 0.7297 |
0.7516 |