Cluster: HRGMv2_2909_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2909
- CGC Family ID: CGCFAM_00391
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2909_14 | HRGMv2_2909_14_53 | 59634 | 61379 | + | 3.A.1.135.5 |
| TC | HRGMv2_2909_14 | HRGMv2_2909_14_54 | 61369 | 63273 | + | 3.A.1.135.5 |
| peptidase | HRGMv2_2909_14 | HRGMv2_2909_14_55 | 63374 | 65347 | - | S09.UNB |
| CAZyme | HRGMv2_2909_14 | HRGMv2_2909_14_56 | 65422 | 67707 | - | GH3 |
Gene ID: HRGMv2_2909_14_53
Type: TC
Location: 59634 - 61379 (+)
Type: TC
Location: 59634 - 61379 (+)
Gene ID: HRGMv2_2909_14_54
Type: TC
Location: 61369 - 63273 (+)
Type: TC
Location: 61369 - 63273 (+)
Gene ID: HRGMv2_2909_14_55
Type: peptidase
Location: 63374 - 65347 (-)
Type: peptidase
Location: 63374 - 65347 (-)
Gene ID: HRGMv2_2909_14_56
Type: CAZyme
Location: 65422 - 67707 (-)
Type: CAZyme
Location: 65422 - 67707 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.