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Genome Details

Selected Rep_genome_ID: HRGMv2_2344
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
UBA3282
→
Species
UBA3282 sp934401915
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG448_bin.15 2,921,367 94.14% 1.33% NA Africa H3AfricaPhase2
HRGMv2_2344 3,014,174 96.55% 1.811% Tanzania Africa HRGM
MGYG000002256 2,755,304 92.12% 2.23% Peru South America UHGG
REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_PheChl_Fiber-Hadza-Nepal_A_6_1188.41 2,726,477 92.71% 1.33% NA Africa Hadza
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_2344_CGC31 CGCFAM_00026 Yes 9 2
HRGMv2_2344_CGC24 CGCFAM_00037 Yes 9 1 alpha-glucan
HRGMv2_2344_CGC39 CGCFAM_00037 Yes 6 1 alpha-glucan
HRGMv2_2344_CGC33 - Yes 12 6 N/A
HRGMv2_2344_CGC12 CGCFAM_00057 Yes 3 1
HRGMv2_2344_CGC26 CGCFAM_00060 Yes 7 2
HRGMv2_2344_CGC7 CGCFAM_00117 Yes 4 1 alpha-glucan
HRGMv2_2344_CGC34 CGCFAM_00168 Yes 16 7
HRGMv2_2344_CGC29 CGCFAM_00193 Yes 9 5
HRGMv2_2344_CGC18 CGCFAM_00287 Yes 34 18
HRGMv2_2344_CGC4 CGCFAM_00390 Yes 10 2
HRGMv2_2344_CGC25 CGCFAM_00498 Yes 9 1
HRGMv2_2344_CGC30 CGCFAM_00569 Yes 7 3
HRGMv2_2344_CGC37 CGCFAM_00710 Yes 8 3
HRGMv2_2344_CGC2 CGCFAM_00725 Yes 3 1 alpha-glucan
HRGMv2_2344_CGC47 CGCFAM_00899 Yes 5 2
HRGMv2_2344_CGC19 CGCFAM_01313 Yes 6 2
HRGMv2_2344_CGC49 CGCFAM_03216 Yes 10 3
HRGMv2_2344_CGC6 CGCFAM_06974 Yes 3 1
HRGMv2_2344_CGC38 CGCFAM_07454 Yes 13 5
HRGMv2_2344_CGC46 CGCFAM_07599 Yes 6 1
HRGMv2_2344_CGC1 CGCFAM_10052 Yes 7 1
HRGMv2_2344_CGC10 CGCFAM_10053 Yes 4 1
HRGMv2_2344_CGC27 CGCFAM_10054 Yes 9 1
HRGMv2_2344_CGC44 CGCFAM_10055 Yes 6 2
Top CAZyme Families