Cluster: HRGMv2_2344_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2344
- CGC Family ID: CGCFAM_10052
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2344_1 | HRGMv2_2344_1_13 | 11572 | 12903 | + | 2.A.1.2.88 |
| pfam | HRGMv2_2344_1 | HRGMv2_2344_1_14 | 12939 | 13529 | - | DUF3877 |
| NULL(UNKNOWN) | HRGMv2_2344_1 | HRGMv2_2344_1_15 | 13908 | 14048 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2344_1 | HRGMv2_2344_1_16 | 14039 | 15067 | + | 3.A.1.24.2 |
| TC | HRGMv2_2344_1 | HRGMv2_2344_1_17 | 15060 | 15719 | + | 3.A.1.24.5 |
| TC | HRGMv2_2344_1 | HRGMv2_2344_1_18 | 15752 | 16669 | + | 3.A.1.24.5 |
| CAZyme | HRGMv2_2344_1 | HRGMv2_2344_1_19 | 16881 | 17951 | + | GH25 |
Gene ID: HRGMv2_2344_1_13
Type: TC
Location: 11572 - 12903 (+)
Type: TC
Location: 11572 - 12903 (+)
Gene ID: HRGMv2_2344_1_14
Type: pfam
Location: 12939 - 13529 (-)
Type: pfam
Location: 12939 - 13529 (-)
Gene ID: HRGMv2_2344_1_15
Type:
Location: 13908 - 14048 (+)
Type:
Location: 13908 - 14048 (+)
Gene ID: HRGMv2_2344_1_16
Type: TC
Location: 14039 - 15067 (+)
Type: TC
Location: 14039 - 15067 (+)
Gene ID: HRGMv2_2344_1_17
Type: TC
Location: 15060 - 15719 (+)
Type: TC
Location: 15060 - 15719 (+)
Gene ID: HRGMv2_2344_1_18
Type: TC
Location: 15752 - 16669 (+)
Type: TC
Location: 15752 - 16669 (+)
Gene ID: HRGMv2_2344_1_19
Type: CAZyme
Location: 16881 - 17951 (+)
Type: CAZyme
Location: 16881 - 17951 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934401915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.