Cluster: HRGMv2_2344_CGC44
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2344
- CGC Family ID: CGCFAM_10055
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2344_19 | HRGMv2_2344_19_40 | 43154 | 43606 | - | 2.A.7.2.1 |
| CAZyme | HRGMv2_2344_19 | HRGMv2_2344_19_41 | 43687 | 45597 | - | GH13_21 |
| CAZyme | HRGMv2_2344_19 | HRGMv2_2344_19_42 | 45619 | 48018 | - | GH31_15 |
| TC | HRGMv2_2344_19 | HRGMv2_2344_19_43 | 48071 | 48949 | - | 3.A.1.1.9 |
| TC | HRGMv2_2344_19 | HRGMv2_2344_19_44 | 48968 | 49858 | - | 3.A.1.1.9 |
| TC | HRGMv2_2344_19 | HRGMv2_2344_19_45 | 49974 | 51746 | - | 3.A.1.1.9 |
Gene ID: HRGMv2_2344_19_40
Type: TC
Location: 43154 - 43606 (-)
Type: TC
Location: 43154 - 43606 (-)
Gene ID: HRGMv2_2344_19_41
Type: CAZyme
Location: 43687 - 45597 (-)
Type: CAZyme
Location: 43687 - 45597 (-)
Gene ID: HRGMv2_2344_19_42
Type: CAZyme
Location: 45619 - 48018 (-)
Type: CAZyme
Location: 45619 - 48018 (-)
Gene ID: HRGMv2_2344_19_43
Type: TC
Location: 48071 - 48949 (-)
Type: TC
Location: 48071 - 48949 (-)
Gene ID: HRGMv2_2344_19_44
Type: TC
Location: 48968 - 49858 (-)
Type: TC
Location: 48968 - 49858 (-)
Gene ID: HRGMv2_2344_19_45
Type: TC
Location: 49974 - 51746 (-)
Type: TC
Location: 49974 - 51746 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934401915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.