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Cluster: HRGMv2_2344_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2344_7 HRGMv2_2344_7_74 87858 89357 + GH51_1
pfam HRGMv2_2344_7 HRGMv2_2344_7_75 89590 90951 + MatE | MatE
CAZyme HRGMv2_2344_7 HRGMv2_2344_7_76 91030 92097 + GT111
TC HRGMv2_2344_7 HRGMv2_2344_7_77 92102 94162 - 1.B.52.2.2
pfam HRGMv2_2344_7 HRGMv2_2344_7_78 94453 95679 + UDPGP
pfam HRGMv2_2344_7 HRGMv2_2344_7_79 95921 96937 + adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NmrA | KR | NAD_binding_10 | GDP_Man_Dehyd
TC HRGMv2_2344_7 HRGMv2_2344_7_80 97082 97732 - 1.C.113.1.2
Gene ID: HRGMv2_2344_7_74
Type: CAZyme
Location: 87858 - 89357 (+)
Gene ID: HRGMv2_2344_7_75
Type: pfam
Location: 89590 - 90951 (+)
Gene ID: HRGMv2_2344_7_76
Type: CAZyme
Location: 91030 - 92097 (+)
Gene ID: HRGMv2_2344_7_77
Type: TC
Location: 92102 - 94162 (-)
Gene ID: HRGMv2_2344_7_78
Type: pfam
Location: 94453 - 95679 (+)
Gene ID: HRGMv2_2344_7_79
Type: pfam
Location: 95921 - 96937 (+)
Gene ID: HRGMv2_2344_7_80
Type: TC
Location: 97082 - 97732 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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