Cluster: HRGMv2_2344_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2344
- CGC Family ID: CGCFAM_10053
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2344_2 | HRGMv2_2344_2_182 | 228558 | 230867 | - | GT35 |
| TF | HRGMv2_2344_2 | HRGMv2_2344_2_183 | 230983 | 231987 | - | LacI |
| pfam | HRGMv2_2344_2 | HRGMv2_2344_2_184 | 232322 | 233209 | + | DegV |
| TC | HRGMv2_2344_2 | HRGMv2_2344_2_185 | 233289 | 234227 | - | 2.A.19.5.2 |
Gene ID: HRGMv2_2344_2_182
Type: CAZyme
Location: 228558 - 230867 (-)
Type: CAZyme
Location: 228558 - 230867 (-)
Gene ID: HRGMv2_2344_2_183
Type: TF
Location: 230983 - 231987 (-)
Type: TF
Location: 230983 - 231987 (-)
Gene ID: HRGMv2_2344_2_184
Type: pfam
Location: 232322 - 233209 (+)
Type: pfam
Location: 232322 - 233209 (+)
Gene ID: HRGMv2_2344_2_185
Type: TC
Location: 233289 - 234227 (-)
Type: TC
Location: 233289 - 234227 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934401915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.