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Cluster: HRGMv2_2344_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_65 82208 83329 + GT4
NULL(UNKNOWN) HRGMv2_2344_4 HRGMv2_2344_4_66 83407 84165 + NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_2344_4 HRGMv2_2344_4_67 84247 86154 + C44.001
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_68 86132 88336 + GT4
peptidase HRGMv2_2344_4 HRGMv2_2344_4_69 88378 90261 + C44.001
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_70 90258 91334 + GT2
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_71 91382 92272 + GT11
TC HRGMv2_2344_4 HRGMv2_2344_4_72 92347 94146 + 3.A.1.106.15
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_73 94178 95212 + GT11
pfam HRGMv2_2344_4 HRGMv2_2344_4_74 95232 96791 + DUF6056
pfam HRGMv2_2344_4 HRGMv2_2344_4_75 96854 97621 + DUF5672
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_76 97689 98633 + GT17
NULL(UNKNOWN) HRGMv2_2344_4 HRGMv2_2344_4_77 98702 99967 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2344_4 HRGMv2_2344_4_78 100064 101476 + 9.B.18.1.2
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_79 101493 102542 + GT4
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_80 102539 103564 + GT2
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_81 103561 104571 + GT2
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_82 104594 105514 + GT11
pfam HRGMv2_2344_4 HRGMv2_2344_4_83 105531 106724 + PS_pyruv_trans
TC HRGMv2_2344_4 HRGMv2_2344_4_84 106780 108309 + 2.A.66.1.40
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_85 108368 109450 + GH105
NULL(UNKNOWN) HRGMv2_2344_4 HRGMv2_2344_4_86 109474 111138 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_87 111135 113048 + GT26 | GT4
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_88 113052 114263 + GT4
pfam HRGMv2_2344_4 HRGMv2_2344_4_89 114295 115314 + Radical_SAM | SPASM
TF HRGMv2_2344_4 HRGMv2_2344_4_90 115343 116368 + SirB
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_91 116452 117600 + GT4
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_92 117657 118520 + GT101
TC HRGMv2_2344_4 HRGMv2_2344_4_93 118539 120311 + 3.A.1.106.15
NULL(UNKNOWN) HRGMv2_2344_4 HRGMv2_2344_4_94 120333 121874 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_95 121867 122607 + GT2
pfam HRGMv2_2344_4 HRGMv2_2344_4_96 122621 122992 + DUF2304
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_97 122997 124112 + GT4
CAZyme HRGMv2_2344_4 HRGMv2_2344_4_98 124135 125043 + GT2
Gene ID: HRGMv2_2344_4_65
Type: CAZyme
Location: 82208 - 83329 (+)
Gene ID: HRGMv2_2344_4_66
Type:
Location: 83407 - 84165 (+)
Gene ID: HRGMv2_2344_4_67
Type: peptidase
Location: 84247 - 86154 (+)
Gene ID: HRGMv2_2344_4_68
Type: CAZyme
Location: 86132 - 88336 (+)
Gene ID: HRGMv2_2344_4_69
Type: peptidase
Location: 88378 - 90261 (+)
Gene ID: HRGMv2_2344_4_70
Type: CAZyme
Location: 90258 - 91334 (+)
Gene ID: HRGMv2_2344_4_71
Type: CAZyme
Location: 91382 - 92272 (+)
Gene ID: HRGMv2_2344_4_72
Type: TC
Location: 92347 - 94146 (+)
Gene ID: HRGMv2_2344_4_73
Type: CAZyme
Location: 94178 - 95212 (+)
Gene ID: HRGMv2_2344_4_74
Type: pfam
Location: 95232 - 96791 (+)
Gene ID: HRGMv2_2344_4_75
Type: pfam
Location: 96854 - 97621 (+)
Gene ID: HRGMv2_2344_4_76
Type: CAZyme
Location: 97689 - 98633 (+)
Gene ID: HRGMv2_2344_4_77
Type:
Location: 98702 - 99967 (+)
Gene ID: HRGMv2_2344_4_78
Type: TC
Location: 100064 - 101476 (+)
Gene ID: HRGMv2_2344_4_79
Type: CAZyme
Location: 101493 - 102542 (+)
Gene ID: HRGMv2_2344_4_80
Type: CAZyme
Location: 102539 - 103564 (+)
Gene ID: HRGMv2_2344_4_81
Type: CAZyme
Location: 103561 - 104571 (+)
Gene ID: HRGMv2_2344_4_82
Type: CAZyme
Location: 104594 - 105514 (+)
Gene ID: HRGMv2_2344_4_83
Type: pfam
Location: 105531 - 106724 (+)
Gene ID: HRGMv2_2344_4_84
Type: TC
Location: 106780 - 108309 (+)
Gene ID: HRGMv2_2344_4_85
Type: CAZyme
Location: 108368 - 109450 (+)
Gene ID: HRGMv2_2344_4_86
Type:
Location: 109474 - 111138 (+)
Gene ID: HRGMv2_2344_4_87
Type: CAZyme
Location: 111135 - 113048 (+)
Gene ID: HRGMv2_2344_4_88
Type: CAZyme
Location: 113052 - 114263 (+)
Gene ID: HRGMv2_2344_4_89
Type: pfam
Location: 114295 - 115314 (+)
Gene ID: HRGMv2_2344_4_90
Type: TF
Location: 115343 - 116368 (+)
Gene ID: HRGMv2_2344_4_91
Type: CAZyme
Location: 116452 - 117600 (+)
Gene ID: HRGMv2_2344_4_92
Type: CAZyme
Location: 117657 - 118520 (+)
Gene ID: HRGMv2_2344_4_93
Type: TC
Location: 118539 - 120311 (+)
Gene ID: HRGMv2_2344_4_94
Type:
Location: 120333 - 121874 (+)
Gene ID: HRGMv2_2344_4_95
Type: CAZyme
Location: 121867 - 122607 (+)
Gene ID: HRGMv2_2344_4_96
Type: pfam
Location: 122621 - 122992 (+)
Gene ID: HRGMv2_2344_4_97
Type: CAZyme
Location: 122997 - 124112 (+)
Gene ID: HRGMv2_2344_4_98
Type: CAZyme
Location: 124135 - 125043 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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