Cluster: HRGMv2_2344_CGC47
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2344
- CGC Family ID: CGCFAM_00899
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2344_23 | HRGMv2_2344_23_8 | 21324 | 22166 | - | 3.A.1.1.2 |
| TC | HRGMv2_2344_23 | HRGMv2_2344_23_9 | 22163 | 23086 | - | 3.A.1.1.2 |
| TC | HRGMv2_2344_23 | HRGMv2_2344_23_10 | 23089 | 24267 | - | 3.A.1.1.6 |
| CAZyme | HRGMv2_2344_23 | HRGMv2_2344_23_11 | 24315 | 25388 | - | GH53 |
| CAZyme | HRGMv2_2344_23 | HRGMv2_2344_23_12 | 25391 | 25951 | - | CBM61 |
Gene ID: HRGMv2_2344_23_8
Type: TC
Location: 21324 - 22166 (-)
Type: TC
Location: 21324 - 22166 (-)
Gene ID: HRGMv2_2344_23_9
Type: TC
Location: 22163 - 23086 (-)
Type: TC
Location: 22163 - 23086 (-)
Gene ID: HRGMv2_2344_23_10
Type: TC
Location: 23089 - 24267 (-)
Type: TC
Location: 23089 - 24267 (-)
Gene ID: HRGMv2_2344_23_11
Type: CAZyme
Location: 24315 - 25388 (-)
Type: CAZyme
Location: 24315 - 25388 (-)
Gene ID: HRGMv2_2344_23_12
Type: CAZyme
Location: 25391 - 25951 (-)
Type: CAZyme
Location: 25391 - 25951 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934401915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.