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Cluster: HRGMv2_2344_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2344_14 HRGMv2_2344_14_43 45490 48186 + GH94
CAZyme HRGMv2_2344_14 HRGMv2_2344_14_44 48203 51268 + GH161
CAZyme HRGMv2_2344_14 HRGMv2_2344_14_45 51269 52609 + GH30_1
STP HRGMv2_2344_14 HRGMv2_2344_14_46 52719 54152 + SBP_bac_1
TC HRGMv2_2344_14 HRGMv2_2344_14_47 54262 55191 + 3.A.1.1.23
TC HRGMv2_2344_14 HRGMv2_2344_14_48 55195 56022 + 3.A.1.1.39
STP HRGMv2_2344_14 HRGMv2_2344_14_49 56158 57744 + SBP_bac_1
TC HRGMv2_2344_14 HRGMv2_2344_14_50 57761 59605 + 9.B.33.1.1
Gene ID: HRGMv2_2344_14_43
Type: CAZyme
Location: 45490 - 48186 (+)
Gene ID: HRGMv2_2344_14_44
Type: CAZyme
Location: 48203 - 51268 (+)
Gene ID: HRGMv2_2344_14_45
Type: CAZyme
Location: 51269 - 52609 (+)
Gene ID: HRGMv2_2344_14_46
Type: STP
Location: 52719 - 54152 (+)
Gene ID: HRGMv2_2344_14_47
Type: TC
Location: 54262 - 55191 (+)
Gene ID: HRGMv2_2344_14_48
Type: TC
Location: 55195 - 56022 (+)
Gene ID: HRGMv2_2344_14_49
Type: STP
Location: 56158 - 57744 (+)
Gene ID: HRGMv2_2344_14_50
Type: TC
Location: 57761 - 59605 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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