Cluster: HRGMv2_2344_CGC46
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2344
- CGC Family ID: CGCFAM_07599
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2344_22 | HRGMv2_2344_22_10 | 7426 | 9087 | - | 3.A.11.1.1 |
| CAZyme | HRGMv2_2344_22 | HRGMv2_2344_22_11 | 9375 | 10862 | + | CBM91 | GH43_12 |
| pfam | HRGMv2_2344_22 | HRGMv2_2344_22_12 | 10870 | 11607 | - | PseudoU_synth_1 | PseudoU_synth_1 |
| TC | HRGMv2_2344_22 | HRGMv2_2344_22_13 | 11659 | 12459 | - | 3.A.1.25.4 |
| TC | HRGMv2_2344_22 | HRGMv2_2344_22_14 | 12551 | 13399 | - | 3.A.1.25.6 |
| TC | HRGMv2_2344_22 | HRGMv2_2344_22_15 | 13423 | 14277 | - | 3.A.1.26.7 |
Gene ID: HRGMv2_2344_22_10
Type: TC
Location: 7426 - 9087 (-)
Type: TC
Location: 7426 - 9087 (-)
Gene ID: HRGMv2_2344_22_11
Type: CAZyme
Location: 9375 - 10862 (+)
Type: CAZyme
Location: 9375 - 10862 (+)
Gene ID: HRGMv2_2344_22_12
Type: pfam
Location: 10870 - 11607 (-)
Type: pfam
Location: 10870 - 11607 (-)
Gene ID: HRGMv2_2344_22_13
Type: TC
Location: 11659 - 12459 (-)
Type: TC
Location: 11659 - 12459 (-)
Gene ID: HRGMv2_2344_22_14
Type: TC
Location: 12551 - 13399 (-)
Type: TC
Location: 12551 - 13399 (-)
Gene ID: HRGMv2_2344_22_15
Type: TC
Location: 13423 - 14277 (-)
Type: TC
Location: 13423 - 14277 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934401915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.