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Cluster: HRGMv2_2344_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2344_10 HRGMv2_2344_10_10 10013 10984 + GH43_26
CAZyme HRGMv2_2344_10 HRGMv2_2344_10_11 11039 12547 + GH51_1
pfam HRGMv2_2344_10 HRGMv2_2344_10_12 12574 12855 + DUF6171
STP HRGMv2_2344_10 HRGMv2_2344_10_13 13189 14673 + SBP_bac_1
TC HRGMv2_2344_10 HRGMv2_2344_10_14 14767 15666 + 3.A.1.1.34
TC HRGMv2_2344_10 HRGMv2_2344_10_15 15668 16549 + 3.A.1.1.34
CAZyme HRGMv2_2344_10 HRGMv2_2344_10_16 16715 18328 + GH43_4
Gene ID: HRGMv2_2344_10_10
Type: CAZyme
Location: 10013 - 10984 (+)
Gene ID: HRGMv2_2344_10_11
Type: CAZyme
Location: 11039 - 12547 (+)
Gene ID: HRGMv2_2344_10_12
Type: pfam
Location: 12574 - 12855 (+)
Gene ID: HRGMv2_2344_10_13
Type: STP
Location: 13189 - 14673 (+)
Gene ID: HRGMv2_2344_10_14
Type: TC
Location: 14767 - 15666 (+)
Gene ID: HRGMv2_2344_10_15
Type: TC
Location: 15668 - 16549 (+)
Gene ID: HRGMv2_2344_10_16
Type: CAZyme
Location: 16715 - 18328 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2344_10_13 vegetarian > vegan 1.37363 0.02258

🧭 Explore Read Mapping of CGC

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