Cluster: HRGMv2_2344_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2344
- CGC Family ID: CGCFAM_01313
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2344_4 | HRGMv2_2344_4_105 | 132349 | 133434 | + | GT8 |
| NULL(UNKNOWN) | HRGMv2_2344_4 | HRGMv2_2344_4_106 | 133469 | 134536 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2344_4 | HRGMv2_2344_4_107 | 134524 | 135762 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_2344_4 | HRGMv2_2344_4_108 | 135789 | 136748 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2344_4 | HRGMv2_2344_4_109 | 136775 | 137761 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2344_4 | HRGMv2_2344_4_110 | 137779 | 139578 | + | 3.A.1.106.15 |
Gene ID: HRGMv2_2344_4_105
Type: CAZyme
Location: 132349 - 133434 (+)
Type: CAZyme
Location: 132349 - 133434 (+)
Gene ID: HRGMv2_2344_4_106
Type:
Location: 133469 - 134536 (+)
Type:
Location: 133469 - 134536 (+)
Gene ID: HRGMv2_2344_4_107
Type: CAZyme
Location: 134524 - 135762 (+)
Type: CAZyme
Location: 134524 - 135762 (+)
Gene ID: HRGMv2_2344_4_108
Type:
Location: 135789 - 136748 (+)
Type:
Location: 135789 - 136748 (+)
Gene ID: HRGMv2_2344_4_109
Type:
Location: 136775 - 137761 (+)
Type:
Location: 136775 - 137761 (+)
Gene ID: HRGMv2_2344_4_110
Type: TC
Location: 137779 - 139578 (+)
Type: TC
Location: 137779 - 139578 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934401915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.