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Cluster: HRGMv2_2344_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2344_9 HRGMv2_2344_9_96 96977 98098 - CE2
CAZyme HRGMv2_2344_9 HRGMv2_2344_9_97 98147 100456 - GH1
TC HRGMv2_2344_9 HRGMv2_2344_9_98 100504 102621 - 1.B.52.2.2
CAZyme HRGMv2_2344_9 HRGMv2_2344_9_99 102638 103759 - CBM35inCE17 | CE17
CAZyme HRGMv2_2344_9 HRGMv2_2344_9_100 103821 104843 - GH130_2
CAZyme HRGMv2_2344_9 HRGMv2_2344_9_101 104890 106068 - GH130_1
pfam HRGMv2_2344_9 HRGMv2_2344_9_102 106132 107301 - GlcNAc_2-epim
TC HRGMv2_2344_9 HRGMv2_2344_9_103 107321 108169 - 3.A.1.1.18
TC HRGMv2_2344_9 HRGMv2_2344_9_104 108169 109194 - 3.A.1.1.11
Gene ID: HRGMv2_2344_9_96
Type: CAZyme
Location: 96977 - 98098 (-)
Gene ID: HRGMv2_2344_9_97
Type: CAZyme
Location: 98147 - 100456 (-)
Gene ID: HRGMv2_2344_9_98
Type: TC
Location: 100504 - 102621 (-)
Gene ID: HRGMv2_2344_9_99
Type: CAZyme
Location: 102638 - 103759 (-)
Gene ID: HRGMv2_2344_9_100
Type: CAZyme
Location: 103821 - 104843 (-)
Gene ID: HRGMv2_2344_9_101
Type: CAZyme
Location: 104890 - 106068 (-)
Gene ID: HRGMv2_2344_9_102
Type: pfam
Location: 106132 - 107301 (-)
Gene ID: HRGMv2_2344_9_103
Type: TC
Location: 107321 - 108169 (-)
Gene ID: HRGMv2_2344_9_104
Type: TC
Location: 108169 - 109194 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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