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Genome Details

Selected Rep_genome_ID: HRGMv2_0312
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→
Species
Lepagella sp900760735
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_0312 3,412,537 98.17% 0.754% UK Europe HRGM
MGYG000001664 3,152,185 96.92% 0.75% United States North America UHGG
Rep_308 3,148,049 93.8365% 0.754717% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0312_CGC18 CGCFAM_00001 Yes 9 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0312_CGC36 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0312_CGC31 CGCFAM_00017 Yes 9 2 fructan
HRGMv2_0312_CGC6 CGCFAM_00118 Yes 7 3
HRGMv2_0312_CGC5 CGCFAM_00145 Yes 8 3
HRGMv2_0312_CGC44 CGCFAM_00146 Yes 6 5
HRGMv2_0312_CGC1 CGCFAM_00296 Yes 7 1
HRGMv2_0312_CGC17 CGCFAM_00395 Yes 26 4
HRGMv2_0312_CGC23 CGCFAM_00544 Yes 16 7
HRGMv2_0312_CGC19 CGCFAM_00574 Yes 15 3
HRGMv2_0312_CGC40 CGCFAM_01017 Yes 7 2
HRGMv2_0312_CGC2 CGCFAM_01067 Yes 8 1
HRGMv2_0312_CGC33 CGCFAM_01250 Yes 13 3
HRGMv2_0312_CGC25 CGCFAM_01312 Yes 11 1
HRGMv2_0312_CGC35 CGCFAM_01461 Yes 12 1
HRGMv2_0312_CGC4 CGCFAM_01462 Yes 8 4
HRGMv2_0312_CGC10 CGCFAM_01521 Yes 9 2
HRGMv2_0312_CGC38 CGCFAM_01593 Yes 17 7
HRGMv2_0312_CGC11 CGCFAM_02250 Yes 7 1
HRGMv2_0312_CGC30 CGCFAM_02871 Yes 15 5
HRGMv2_0312_CGC28 CGCFAM_03988 Yes 9 4
HRGMv2_0312_CGC21 CGCFAM_05974 Yes 9 1
HRGMv2_0312_CGC15 CGCFAM_09590 Yes 4 1
Top CAZyme Families