Cluster: HRGMv2_0312_CGC33
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0312
- CGC Family ID: CGCFAM_01250
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0312_15 | HRGMv2_0312_15_45 | 49024 | 50616 | - | CBM32 | GH43_24 |
| CAZyme | HRGMv2_0312_15 | HRGMv2_0312_15_46 | 50681 | 52990 | - | GH105 | GH154 |
| TF | HRGMv2_0312_15 | HRGMv2_0312_15_47 | 53043 | 53444 | - | HTH_AraC |
| STP | HRGMv2_0312_15 | HRGMv2_0312_15_48 | 53384 | 57148 | - | HATPase_c | HisKA | Response_reg | Y_Y_Y |
| TC | HRGMv2_0312_15 | HRGMv2_0312_15_49 | 57738 | 61028 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0312_15 | HRGMv2_0312_15_50 | 61044 | 63152 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | HRGMv2_0312_15 | HRGMv2_0312_15_51 | 63282 | 64097 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0312_15 | HRGMv2_0312_15_52 | 64168 | 65769 | + | GH16_3 |
| NULL(UNKNOWN) | HRGMv2_0312_15 | HRGMv2_0312_15_53 | 65976 | 67586 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0312_15 | HRGMv2_0312_15_54 | 67678 | 69585 | - | 9.B.14.3.1 |
| pfam | HRGMv2_0312_15 | HRGMv2_0312_15_55 | 69575 | 71197 | - | DHOR |
| peptidase | HRGMv2_0312_15 | HRGMv2_0312_15_56 | 71255 | 72415 | - | M75.UPW |
| TC | HRGMv2_0312_15 | HRGMv2_0312_15_57 | 72460 | 73803 | - | 1.B.3.3.1 |
Gene ID: HRGMv2_0312_15_45
Type: CAZyme
Location: 49024 - 50616 (-)
Type: CAZyme
Location: 49024 - 50616 (-)
Gene ID: HRGMv2_0312_15_46
Type: CAZyme
Location: 50681 - 52990 (-)
Type: CAZyme
Location: 50681 - 52990 (-)
Gene ID: HRGMv2_0312_15_47
Type: TF
Location: 53043 - 53444 (-)
Type: TF
Location: 53043 - 53444 (-)
Gene ID: HRGMv2_0312_15_48
Type: STP
Location: 53384 - 57148 (-)
Type: STP
Location: 53384 - 57148 (-)
Gene ID: HRGMv2_0312_15_49
Type: TC
Location: 57738 - 61028 (+)
Type: TC
Location: 57738 - 61028 (+)
Gene ID: HRGMv2_0312_15_50
Type: pfam
Location: 61044 - 63152 (+)
Type: pfam
Location: 61044 - 63152 (+)
Gene ID: HRGMv2_0312_15_51
Type:
Location: 63282 - 64097 (+)
Type:
Location: 63282 - 64097 (+)
Gene ID: HRGMv2_0312_15_52
Type: CAZyme
Location: 64168 - 65769 (+)
Type: CAZyme
Location: 64168 - 65769 (+)
Gene ID: HRGMv2_0312_15_53
Type:
Location: 65976 - 67586 (+)
Type:
Location: 65976 - 67586 (+)
Gene ID: HRGMv2_0312_15_54
Type: TC
Location: 67678 - 69585 (-)
Type: TC
Location: 67678 - 69585 (-)
Gene ID: HRGMv2_0312_15_55
Type: pfam
Location: 69575 - 71197 (-)
Type: pfam
Location: 69575 - 71197 (-)
Gene ID: HRGMv2_0312_15_56
Type: peptidase
Location: 71255 - 72415 (-)
Type: peptidase
Location: 71255 - 72415 (-)
Gene ID: HRGMv2_0312_15_57
Type: TC
Location: 72460 - 73803 (-)
Type: TC
Location: 72460 - 73803 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900760735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.