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Cluster: HRGMv2_0312_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0312_3 HRGMv2_0312_3_143 187303 188757 - 2.A.2.3.4
CAZyme HRGMv2_0312_3 HRGMv2_0312_3_144 188824 189993 - GH130_1
CAZyme HRGMv2_0312_3 HRGMv2_0312_3_145 190069 191271 - GH26
NULL(UNKNOWN) HRGMv2_0312_3 HRGMv2_0312_3_146 191490 193106 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0312_3 HRGMv2_0312_3_147 193147 194037 - UbiA
TC HRGMv2_0312_3 HRGMv2_0312_3_148 194056 195900 - 3.A.1.106.1
TC HRGMv2_0312_3 HRGMv2_0312_3_149 196184 197449 - 2.A.1.2.97
STP HRGMv2_0312_3 HRGMv2_0312_3_150 197699 198205 - Sigma70_r2 | Sigma70_r4_2
TC HRGMv2_0312_3 HRGMv2_0312_3_151 198418 199698 - 9.A.40.2.2
Gene ID: HRGMv2_0312_3_143
Type: TC
Location: 187303 - 188757 (-)
Gene ID: HRGMv2_0312_3_144
Type: CAZyme
Location: 188824 - 189993 (-)
Gene ID: HRGMv2_0312_3_145
Type: CAZyme
Location: 190069 - 191271 (-)
Gene ID: HRGMv2_0312_3_146
Type:
Location: 191490 - 193106 (-)
Gene ID: HRGMv2_0312_3_147
Type: pfam
Location: 193147 - 194037 (-)
Gene ID: HRGMv2_0312_3_148
Type: TC
Location: 194056 - 195900 (-)
Gene ID: HRGMv2_0312_3_149
Type: TC
Location: 196184 - 197449 (-)
Gene ID: HRGMv2_0312_3_150
Type: STP
Location: 197699 - 198205 (-)
Gene ID: HRGMv2_0312_3_151
Type: TC
Location: 198418 - 199698 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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